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CAZyme Information: MGYG000000403_01227

You are here: Home > Sequence: MGYG000000403_01227

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; UBA4716;
CAZyme ID MGYG000000403_01227
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
679 75590.81 4.9933
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000403 2138464 MAG Sweden Europe
Gene Location Start: 72;  End: 2111  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000403_01227.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 100 372 3.5e-42 0.7723076923076924

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.23e-12 142 394 237 508
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 4.32e-06 140 302 82 282
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 8.02e-06 145 218 159 234
polygalacturonase
PLN02155 PLN02155 7.35e-04 144 305 146 306
polygalacturonase
PLN03003 PLN03003 0.002 119 225 113 221
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ93866.1 3.39e-215 2 677 35 715
BCJ98361.1 8.89e-204 2 677 35 715
AIQ74952.1 3.92e-51 17 388 69 475
AWV34270.1 7.08e-50 17 388 69 475
QUT72620.1 2.24e-47 18 389 92 460

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000041 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000403_01227.