dbCAN-seq: a database of CAZyme sequence and annotation

You are browsing environment: HUMAN GUT

help

CAZyme Information: MGYG000000398_01228

You are here: Home > Sequence: MGYG000000398_01228

Basic Information help

Species

Lineage

Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; TF01-11;

CAZyme ID

MGYG000000398_01228

CAZy Family

GH59

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1110	MGYG000000398_7\|CGC1	120655.68	5.4396

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000398	2936252	MAG	Sweden	Europe

Gene Location

Start: 35698; End: 39030 Strand: +

Full Sequence Download help

MLKRFLKQAG ACLLSVSMIL TSNVGSAGVS ASSRKGDAVE TKTGSIVING DDIKADNVNG	60
LTYKGFGLLS ANSTSDLLMD YKSQNPEKYA ELMQYLFGGQ YPIFTHVKLE MGNDSNTSTG	120
PESATMRTRD EKANVLRNPG WQLAADAKKI NPNLKVSILS WCTPTWVKKD EDKYYWYKQS	180
ILAAYEQYGF MVDYINPNTN ESWGGKGDIA TTKKFAQWIA EESADTISDE KELALFHKIK	240
LIVSDEANVV SDSVAENLKS DQEFMDAVDV VGYHYKTADD SNGGMKWFAE EMDKEVWNSE	300
EQATFSNSAF RPAGNDKAPT VAGTGIGGSG SALEMGNTVI KSFVDSRRSH VIYQPAIGSF	360
YEGGEYSFKE LVSARDPWSG WMHYDAGLLV LAHISKFAVT GWENESNTAG IWRGVPSASK	420
ASAVQTTSSN AVDGRVGGEN YMTLAAPTKD NFSTVIVNDS EYPMTYTLKT ENMNLKADQK	480
LELWETRAAD DGAFNENYMK RIQEVSADAE GVYSFEVKPN SAVTVTTLEV SDSEEHTKAL	540
PVEGERTVLD TDATGDVQDT ANEYLYADNF EYTGKTVPVL DGKGGFTGET EDYIASRGGD	600
TGAMARYTHT LNGAFEVYKD ENGNHVLRQQ RDKQATGVGR AWNKGDPVTL IGDYRWTNYA	660
ASIDVMFERA ADSQYAQVGI RQTGRTYNIS NCAGYSLKVN DNGTWALYRA KFGSSSASGE	720
ELASGSVDAS QVTPETWFNL ELRGEGNVIK AYVNNSLIAE YEDANPITSG RIAIGSGNTY	780
TRFDNLEVKK LEGYAPYYNE YIDNMETYDL TPEKNPKLVY DDKWSITCQN HGMYTYQRSA	840
SYSTGVGATL SYTFKGTGLE ILGYNKSDKT TLNVTVDGNI YQTAAPLWKS DNMCTEYQLA	900
GLEDAQHTVT IEVASGSLAV DAVAVTGSVY GAKADETPSP APSATAVPSA APSGAPAQDP	960
QTQTLTVKKG DTFKVKDITY VVTNAEKKTV VLKKAENKKS KAIVVPASVK TAAGTFRVTG	1020
ISDKAFAGCS SLTKVTIGKN VTSIGKEAFA KDKNLKKIVI KSSGLKKVGK NAIKGISGKA	1080
KISCGKKNVT AYKKLFTGKT GYVKSMKITK	1110

Enzyme Prediction help

EC	3.2.1.23

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH59	57	789	1.2e-171	0.993660855784469

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam02057	Glyco_hydro_59	1.29e-93	63	395	1	292	Glycosyl hydrolase family 59.
sd00036	LRR_3	3.53e-12	1003	1075	65	127	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.
sd00036	LRR_3	8.67e-12	1003	1082	19	88	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.
sd00036	LRR_3	3.65e-11	1018	1075	48	104	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.
sd00036	LRR_3	5.48e-11	1021	1083	5	66	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ACL75594.1	5.87e-298	47	932	35	915
ABG76970.1	5.87e-298	47	932	35	915
AJQ96197.1	1.42e-289	45	925	308	1183
AUX40340.1	2.22e-289	45	925	56	931
QNK59157.1	9.16e-289	46	925	315	1188

PDB Hits help

has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P54804	8.89e-25	45	789	19	666	Galactocerebrosidase OS=Canis lupus familiaris OX=9615 GN=GALC PE=1 SV=1
B5X3C1	8.22e-24	60	668	34	550	Galactocerebrosidase OS=Salmo salar OX=8030 GN=galc PE=2 SV=1
O02791	6.17e-23	60	789	52	682	Galactocerebrosidase OS=Macaca mulatta OX=9544 GN=GALC PE=1 SV=2
Q5SNX7	9.91e-23	60	788	30	657	Galactocerebrosidase OS=Danio rerio OX=7955 GN=galc PE=2 SV=1
P54803	9.93e-22	60	789	52	682	Galactocerebrosidase OS=Homo sapiens OX=9606 GN=GALC PE=1 SV=3

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000395	0.998863	0.000211	0.000195	0.000178	0.000156

TMHMM Annotations help

There is no transmembrane helices in MGYG000000398_01228.