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CAZyme Information: MGYG000000389_00076

You are here: Home > Sequence: MGYG000000389_00076

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Roseburia sp900550935
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia sp900550935
CAZyme ID MGYG000000389_00076
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
420 MGYG000000389_1|CGC2 47022.72 4.2863
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000389 2762523 MAG Sweden Europe
Gene Location Start: 86420;  End: 87682  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000389_00076.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 1.98e-14 345 406 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 5.64e-09 316 406 20 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 6.70e-07 336 404 117 181
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam13620 CarboxypepD_reg 8.21e-05 21 114 5 81
Carboxypeptidase regulatory-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VCV21206.1 2.38e-252 1 420 1 419
AWY98201.1 2.11e-202 10 420 12 421
ASM69598.1 2.08e-195 10 420 12 421
QJU21247.1 8.17e-194 7 420 3 416
ANU48790.1 1.64e-193 7 420 3 416

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000389_00076.