CAZyme Information: MGYG000000354_01073

Basic Information

• Species: CAG-485 sp001701295
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp001701295
• CAZyme ID: MGYG000000354_01073
• CAZy Family: GH87
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1311	MGYG000000354_11|CGC1	142980.97	4.3939

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000354	2905675	MAG	Sweden	Europe

• Gene Location: Start: 36510; End: 40445 Strand: -

Full Sequence      

MLKIFRTIPLAALALAGVAATAGATVADKYPIPASDAKGVRGATVSYTRYDCNDARDAEL
DGGATLERDKTWNRFQITSQASDQTYVKMPVGATVTWNMNTYGDGVTVRYTIADKHDGGH
GQEGGYALNEGELEFYVNDQYAGKVVLSSYYMYHYFKQGVGDPSHSIDPTASPAFAFDER
HTVLSRMMKPGDRLTVKCTSGDAVGVDFVETEVVPEVISEEEAGEGRQVFNVLSYGAKAD
DPSKDNRGAFNAAIAAANKVGGVVYVPEGTWYMGMSDKGNAANQQGIWGFSAKNVKITGA
GMWHTNIQFTGWLCFGGGVSAGNPTIGGTSDADNLEFCNMYLNSNLSWRNEPQAVYKAFM
DLWTGGSVIHDVWMEHFEAGIWFGDYNSNPRRACEDSKIVNCRIRNNLADGVNFCQGTSN
SAVINCNVRNSGDDGLAMWANNDGNVKNEDGNIFCFNTVEHIWRAGAIAVYGGTDQKVYN
NWIGESFISSGFHANDTFPGHKWGATADKPVIVENNYFVRAGSYWDIFNRPYGAIDLQDG
LSNIIIRNNHFWECPAEAISVHNAQTNVVFDGVYVNGAGLSGQANDWSASNHTLGAGGFQ
NRSLGSLVFKNFELVEGSVPPATIGAELDEYEWPFWGGAPDFTWVSEDAIDWAETPPYPD
SEGIIPAPDPFETLTDYDIVLTGIDWTTNQGKHSMYEGDIVTFRVRIDNKGIKGIPEDAK
FTVRFNVDNTYSSSYTVKEGIGAGESMILEFPVSWAATLGEHTFTATVDPAGKLLHEINR
TNNTRVKNVNVRELPEGEEPEIEITTHSGPDMGVVKVYFENLTRQDGETKVGDILMPHAI
VANYGSETIRLGSGQGVLWALNGTPEYNTGMLWDDTEHTVAPGEWIDVTPCGGGMGNGSL
ASLGWNTNDWTYTVSEGTVDLWCRMDSPAKYNDNDASNNALSQTYDFPKTKPVYNENPDK
ADNLATGGYHDYEDEEGGSTEDPVTGFDLVASAVNWTPGHKEIEAGQEIGNFEVVVKNNS
TVAFPSEKTFRVTYYIDGQQKGYADWTEGIESNGEVAVKISGNYTATAGAHTVKAVIRNV
AGELSTDNNSRERTFNAKGDVAFIEPATEYVTGFSEDQVNGMSLVIRRIFWSKPGRAGEG
IRPGDKVVFSAEIYNNGTERTPDRKHGMLLETLPSYDPKYWSDDHKTGLAPGESMILTTC
GGSVSTTGEWTAAEGTTNFRVMLDDQNDFGLKDKPGMTIQSMPVEIVAAPQAVEMHENPT
GADNVETGVGILTDEEMSDMTDVWYTLQGIRVKRPTTAGVYIHNGKKVVVK

Enzyme Prediction     

EC	3.2.1.59

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH87	41	613	4.3e-113	0.8241206030150754

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd14490	CBM6-CBM35-CBM36_like_1	1.76e-18	42	211	1	156	uncharacterized members of the carbohydrate binding module 6 (CBM6) and CBM35_like superfamily. Carbohydrate binding module family 6 (CBM6, family 6 CBM), also known as cellulose binding domain family VI (CBD VI), and related CBMs (CBM35 and CBM36). These are non-catalytic carbohydrate binding domains found in a range of enzymes that display activities against a diverse range of carbohydrate targets, including mannan, xylan, beta-glucans, cellulose, agarose, and arabinans. These domains facilitate the strong binding of the appended catalytic modules to their dedicated, insoluble substrates. Many of these CBMs are associated with glycoside hydrolase (GH) domains. CBM6 is an unusual CBM as it represents a chimera of two distinct binding sites with different modes of binding: binding site I within the loop regions and binding site II on the concave face of the beta-sandwich fold. CBM36s are calcium-dependent xylan binding domains. CBM35s display conserved specificity through extensive sequence similarity, but divergent function through their appended catalytic modules.
pfam13229	Beta_helix	1.09e-09	394	572	8	155	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	2.09e-07	414	592	4	152	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam07705	CARDB	7.92e-07	694	787	14	101	CARDB. Cell adhesion related domain found in bacteria.
pfam13229	Beta_helix	9.06e-06	366	481	38	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUB83803.1	6.86e-182	28	1311	25	1255
ANR73273.1	5.62e-162	24	922	21	869
QUB58650.1	5.77e-162	24	922	22	870
QUB56055.1	5.77e-162	24	922	22	870
QUB45559.1	5.77e-162	24	922	22	870

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5ZRU_A	6.74e-93	41	611	12	555	ChainA, Alpha-1,3-glucanase [Niallia circulans],5ZRU_C Chain C, Alpha-1,3-glucanase [Niallia circulans]
6K0M_A	5.90e-11	131	548	87	481	Catalyticdomain of GH87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11 [Paenibacillus glycanilyticus],6K0N_A Catalytic domain of GH87 alpha-1,3-glucanase in complex with nigerose [Paenibacillus glycanilyticus]
6K0S_A	5.90e-11	131	548	87	481	Catalyticdomain of GH87 alpha-1,3-glucanase D1069A in complex with nigerose [Paenibacillus glycanilyticus],6K0V_A Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides [Paenibacillus glycanilyticus],6K0V_B Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides [Paenibacillus glycanilyticus],6K0V_C Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides [Paenibacillus glycanilyticus],6K0V_D Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides [Paenibacillus glycanilyticus]
6K0Q_A	3.07e-10	131	548	87	481	Catalyticdomain of GH87 alpha-1,3-glucanase D1068A in complex with nigerose [Paenibacillus glycanilyticus],6K0U_A Catalytic domain of GH87 alpha-1,3-glucanase D1068A in complex with tetrasaccharides [Paenibacillus glycanilyticus]
6K0P_A	5.33e-10	131	548	87	481	Catalyticdomain of GH87 alpha-1,3-glucanase D1045A in complex with nigerose [Paenibacillus glycanilyticus]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000370	0.998921	0.000178	0.000195	0.000169	0.000159

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000354_01073.