logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000289_01153

You are here: Home > Sequence: MGYG000000289_01153

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella buccae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella buccae
CAZyme ID MGYG000000289_01153
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
858 MGYG000000289_13|CGC1 95161.17 7.282
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000289 3001000 MAG Sweden Europe
Gene Location Start: 20203;  End: 22779  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 57 301 2e-69 0.9814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 8.73e-127 1 845 1 755
beta-glucosidase BglX.
PLN03080 PLN03080 2.30e-106 16 842 34 770
Probable beta-xylosidase; Provisional
COG1472 BglX 3.75e-74 25 404 13 368
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 1.03e-47 374 742 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 3.34e-39 35 333 39 315
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCS85397.1 0.0 18 854 2 838
ADD92014.1 0.0 18 852 44 880
QVJ82149.1 0.0 1 856 1 861
ADE82109.1 0.0 1 856 1 861
ACN78955.1 0.0 1 856 1 861

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z87_A 5.32e-88 45 857 102 785
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
5Z9S_A 6.59e-78 16 856 9 787
Functionaland Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum],5Z9S_B Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum]
7VC7_A 2.26e-76 25 838 16 715
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 2.26e-76 25 838 16 715
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
6R5I_A 5.79e-73 80 854 83 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 0.0 1 856 1 861
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q56078 3.78e-92 26 844 63 754
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
Q94KD8 2.09e-91 16 858 37 767
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
P33363 2.73e-91 26 844 63 754
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q9SGZ5 1.06e-89 18 846 32 762
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000545 0.998702 0.000174 0.000199 0.000179 0.000171

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000289_01153.