CAZyme Information: MGYG000000287_04406

Basic Information

• Species: Robinsoniella sp900539655
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
• CAZyme ID: MGYG000000287_04406
• CAZy Family: GH140
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1585	MGYG000000287_92|CGC1	176057.98	4.8023

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000287	7249439	MAG	Sweden	Europe

• Gene Location: Start: 15223; End: 19980 Strand: +

Full Sequence      

MKKTFRRLIAVLLSICVVLSVGLTDNVTALAGEAKVLKTLPATQAGEAKTGKTLPATQAE
VWKRTDIILTSDKEYENPYLDVEIDAVFEHTDGTKIHLYGFWNGEDEWRVRFAPTKTGTW
NYTITSSDTANTGLHNVSGRVEAVPNTGNTDLDRHGFVRISDNGRYFTYDDGTPFYWLGD
TNWQAPNYVSTTQCNYPDCKCQNQFRHEVDDRLNKGFNVYQTYFDSGENDGGGQLATTSE
PSIWLDKYNRINPDTFTDKIDGMFDYLADNGMVIALGYGVHSHTVNGMGQEAIEQISRYL
TARYASYPVVWITAQEITGEPQYNVWKASAEIVDQGDGYNHPQGAHQFPMDNTNDYTRDL
DNQPWHEWWGLQNGHGPLQQSKDLYKSYWDNEKVKPYLELEANYEDISCGGFNGYDASRI
SAWRTNLLGSYGFTYGVTGVWANNYSTAGNMGWYGSFSYEPWYMGLDKPGSNEMMYLRSF
FEYVRFYELIPRFNDTAYSDCTAENKVVASTEDGKTYVAYFYNKDLSTGTLSALNTDEVY
TARWYNPLTGKFINEAEGITAAEGTYEIPGKPTAGDWVFLLTSENFGDYEEEMVYDDPFI
SHRENLAVGAAATASSDNSSSISFAADCAVDGDYDTYWCADSGEMPQWLELDMGEPKSFQ
EINILMHRGMSTRTEKVSYSIQGSLDGESWEEIFAATDQKPTVVKNTDRLRITREGTYRY
LRLEYTDITSNWAAVYEVEVFADKSPEDETDELENLADLSTAEASSQSGTSTADKAVDGN
SSTWWCADSGNMPQWLSLDLKEEKTFNMIRMYMYGGTSSVDYTILGSNDKEDWQPIYTGI
DEIPEQAVNSQSVFLNIPAAGTYRYLKVEFSKVEGNWATIVELEVYNDLALSNVNHAADA
SVTASSVSAPISAPSKSVDGNMTTYWCASSGDMPQWIQYDLGESKKIGFINMYMVGGTSS
VSYQLEGSVDGSNWSLITEEADKKPINKGGLSLVEILTDCNFQYLKLTFLDVQGNWPTMS
EFEVYSEAIAPPEDDEVPIYEGVMQTPLVKSVGSAVYTEDGVYSNTDSSLFDGDTSTEWI
PYGPIGSQTIIMDLLQENVLHGIVVKLGSGAYLPKYRIEGSNNKTDWTILADATLRDPQV
YQKDGGQAVYESLSGQYRYVKLLWLNAPGNSTNKQIAEMELYADLETPDHPQTTQTDELQ
SLYNDWKVKNNSRQIYTNTSWRALQAQLQAAGRLLVDPYASPAEVDRVTNELKAVVNGLE
EKSDKKELQALVNTAEGKQEKDYTSQSFRVFAQALRDARDVLADYDAGKQTADQAYAALY
QAQNALVRITHPNPPAEPVKVNSIKLNKTRERLFVKEKLKLSVSVSPADAKDQTVTWSSS
NPAAATVDAAGNVTAKKKGTAVITAKAKDGSGKSASCSVTVVKATVKLNAKSIQLQLRKS
TNVIKVFGLQKGDKIKSWSSSKKSVASVDKKGKITAKKTGNAAITVKTRKGASAKLTVKV
VKSKVTTKSIRADISKLTLTKGKSRKLHVTRTPLTATEKITYETSNKRVADVNKSGKITA
KKRGRADITVKTANGKSYKVKVTVR

Enzyme Prediction     

No EC number prediction in MGYG000000287_04406.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH140	157	578	6.3e-57	0.9927184466019418
CBM32	613	738	9.7e-23	0.9596774193548387
CBM32	760	883	4.9e-22	0.9435483870967742
CBM32	899	1021	1.9e-19	0.9435483870967742

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13204	DUF4038	3.47e-51	163	482	1	318	Protein of unknown function (DUF4038). A family of putative cellulases.
pfam16586	DUF5060	2.23e-24	58	127	1	70	Domain of unknown function (DUF5060). This is the N-terminal domain of a putative glycoside hydrolase, DUF4038. It is found in a number of different bacterial orders.
COG5492	YjdB	1.49e-17	1337	1488	177	321	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam00754	F5_F8_type_C	1.05e-16	901	1024	1	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754	F5_F8_type_C	7.03e-16	761	883	1	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNK56434.1	6.76e-139	60	1025	38	962
QTH41603.1	3.36e-101	60	742	41	700
BBI36498.1	5.73e-92	62	1026	41	1051
QTH45264.1	5.78e-90	60	587	41	573
QJD82871.1	4.93e-84	60	592	41	578

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MSY_A	4.75e-22	155	595	15	457	Glycosidehydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_B Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_C Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482]
3KZS_A	8.43e-20	155	595	15	457	Crystalstructure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_B Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_C Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3KZS_D Crystal structure of glycosyl hydrolase family 5 (NP_809925.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482]
4QFU_A	4.12e-19	154	551	27	430	ChainA, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_B Chain B, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_C Chain C, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_D Chain D, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_E Chain E, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_F Chain F, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_G Chain G, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_H Chain H, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_I Chain I, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_J Chain J, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_K Chain K, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482],4QFU_L Chain L, glycoside hydrolase family 5 [Phocaeicola vulgatus ATCC 8482]
4N0R_A	2.39e-09	60	346	6	287	ChainA, putative glycoside hydrolase [Phocaeicola vulgatus ATCC 8482],4N0R_B Chain B, putative glycoside hydrolase [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P33747	3.78e-11	1337	1514	33	213	Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2
P35838	7.68e-06	1339	1426	230	321	Uncharacterized protein CA_C0552 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_C0552 PE=4 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.002025	0.995608	0.001105	0.000617	0.000341	0.000261

TMHMM  Annotations     

start	end
7	29