CAZyme Information: MGYG000000287_02945

Basic Information

• Species: Robinsoniella sp900539655
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
• CAZyme ID: MGYG000000287_02945
• CAZy Family: GH127
• CAZyme Description: Non-reducing end beta-L-arabinofuranosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
645	MGYG000000287_45|CGC1	74034.32	4.8656

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000287	7249439	MAG	Sweden	Europe

• Gene Location: Start: 6798; End: 8735 Strand: +

Full Sequence      

MEKLTLVELNRTKIRDSYWDRYIDLVKSKIIPYQWNILNDNIPDVQTSHGLMNFKIAAKR
EIGEFYGVVFQDTDVAKWLEAVALSLASQKDEELEHTADEVIDLIEAAQQPDGYINTYYT
IKEPDKRWSNLEEGHELYTAGHLMEAAAAYYRATGKRKFLDCICKFADLICNVFSPEHNK
DGYPGHQEVEIGLVKLYEVTGNKAYLAQAKEFLDRRGREPNYFLEEEKRPDYKRIFPEFE
NYLPLYSQSHKPIREQDTAEGHAVRAVYMYCAMADVAYEYQDQELLRVCRALWDDITYKK
MYITGSIGSSGLLERFTTGYDLPNNSNYSETCASIGLALFGRRMAQITRDSKYMDVVERA
LYNTLLSGVAMDGQSFFYVNPLEVWPDNCLPRTSMEHVKPVRQKWFGVACCPPNIARTLA
SIGEYIYFYDKSSVWINLFISSETSVEIEGHPVHLSQKTAFPNDGSVEICIENNDEAEFE
LAIRIPEYVKKYDLFLDGKPVTAKVQKGYAKVMVSGKNPLLVYKFALAPRILRANPLVKE
DVGKVAVMKGPVVYCLEEVDNGKNLPAVFLDPEQELQESYEENLLGGTTIIRTAGKKVMT
DGWQSDELYKESDLTMESIPLMFVPYPYWGNRRTGEMLVWVKEFI

Enzyme Prediction     

No EC number prediction in MGYG000000287_02945.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	13	555	4.7e-211	0.9961832061068703

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3533	COG3533	1.10e-179	18	643	22	587	Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam07944	Glyco_hydro_127	1.12e-160	13	555	3	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ABX40978.1	1.93e-314	1	645	1	646
QMW80468.1	2.79e-291	2	645	4	650
QIB56758.1	2.79e-291	2	645	4	650
QAA32625.1	4.41e-291	2	645	7	651
QBE96220.1	9.20e-290	2	645	4	650

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4QJY_A	2.70e-223	14	643	18	647	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	4.31e-217	14	643	18	647	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
3WRE_A	8.75e-138	14	643	5	658	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]
3WKW_A	1.21e-137	14	643	5	658	Crystalstructure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form [Bifidobacterium longum subsp. longum JCM 1217],3WKX_A Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form [Bifidobacterium longum subsp. longum JCM 1217],7BZL_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7DIF_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXV_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXW_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]
7EXU_A	3.39e-137	14	643	5	658	ChainA, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	4.79e-137	14	643	5	658	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.999816	0.000229	0.000006	0.000001	0.000000	0.000002

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000287_02945.