CAZyme Information: MGYG000000287_01708

Basic Information

• Species: Robinsoniella sp900539655
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
• CAZyme ID: MGYG000000287_01708
• CAZy Family: GH141
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1758	MGYG000000287_17|CGC2	195404.33	4.5592

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000287	7249439	MAG	Sweden	Europe

• Gene Location: Start: 54435; End: 59711 Strand: -

Full Sequence      

MRREMKKGIKSKITAAVLAASMVVSSLSVYDVSYASEQSEDSVMAEIYVSPSGSAQGSGT
AQDPLQTMDQAREKVRTMNQNMTGDILVYFEDGDYFMDRTASFQYEDSGSNGYQIVYKAL
EGSKPVFTSGKEISGWTDANDPKRPGLMKAQAPGVENTRELYVDGEMAVKAKGQVPGSIQ
RAGDYENYTTYSGTHKAYYGYKSNAVEMLNWKNIQDIEFVYDILWVHRISPIESIQDLGN
NEIYIKMDWESFRLNQIAGGNQVHADVPSYIENAYELLDEPGEWYFDKTDKTIYYMPKEG
QNMDTAEVIVPSTEQFITVYGEADTKVTDITFEGLSFEYNTWLYPSLYGWPDQQANFAHD
PKETENMHGYSLTPQAAIETKMSQNITFSECNFQNIGSGAISLLKGSENNVVEKCVFQDI
SGGGVLIGGVNINDAHPVTMDENATLDEIKEAMQKHADDPGQSPHDERYIVKDNVVTNCY
FNRIGTEYKGSIAVLAGYTDGTVITHNTIKNVAYSGISVGWGWGFWDQTGRSQSTEAGEI
TPDCYPVFQLGDAAVSRNNIIEYNDVGYCMTKMHDGGIYTLGDMPGSSISYNSIHNMSSW
PGGLYLDEGSGGMKVEGNISYDTPYTCFYNIREFTWGHRMDQPDFKENYWNTAPESDAYP
EDIASQIGIEKKYESIRPKELNTVTAPDYIKAGDQITLEGYFGSETGRVVMTGPDGEVSV
DAKSPCLVSWENNKIVFLVPGGVSSGSIYVEAADHSQTNKNKTLTVFGGEKELFGDDFES
YNPGKLNDQQAAVEKYTFLHDRISIAEEDGNKILRMNSNGSDTYLTKDADWEDIKISFDY
RFDADTKDFGGIYISPRNLNKENRYLANLLPHFRNGIFYQRYLNNGYSEHGDTNFSYEVG
TWYSIKMEMTGDKLLVKMWKRSEEEPSEWTGSANFGGIKKGGFYLQYSDSSGESTAFSSF
DNLLITTFQEGVTEDLGQDVEAPVTNAEITGETTETGAYINQAKIELKSVDNGSGVAGIR
WQLDGGTLQDYVSPVEVSKDGPFTLTYFAYDRAGNKEEPKEVTGTVAQGKVIFEENFDTY
EEGNFTDPDERGYQLTNPEQFLVVSGQSQTGKALKIQGKKDTAVRMTKQDSWDGTVMTLD
FKYQEELNGIEGLYVSNYFQSYSPDNMHVYPIIPGYGGILLQQNVNGNAREAARLENKKI
SLKPGSWYHMKAYTSGSEMKVKVWKDGSQEPASWMAKGEVSGLQGGGGLHLGFSTGGNEA
NYALFDNIRIIGFAEQGPADLTKLQKVYDEGREKEKDTDYTQESIKNLKAVLDKAEILLG
RDDLAENDQNDVDALQKQVENAIKNLVLRPADKTALESKVDEVLHIDLELYTEESSRRLK
NALDEAQKLLEKDLTVQDQNLIQEAVDELDAGIGELEEISEPGTETEPGTETEPGTETEP
GTETEPGTETEPGTETEPGTETEPGTETEPGTETEPGTETEPGTETEPGTETEPGTETEP
GTETEPGTETEPATEAVYQVVFQSYDGKVLSRQSVKNHGAANAPNAPSRKGYSFSGWSAS
YGNVTQNLVITARYKANTYRITFRSNGGKGSMSSQTVTYDKSTKLKANRFKKSGYVLKSW
NTKKNGKGKSYTNQKTIKNLTYVNGKTITLYAQWKKVSKPDTVKKVSASSKKAKMCTVVV
TNVKKADGYQIRYATDKAFKNVKTVYVNEGKGKKTTKELKGLKRKKTYYVKVRAYVKDSA
GKRWYSKDYSKVRSIKIK

Enzyme Prediction     

No EC number prediction in MGYG000000287_01708.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH141	46	620	1.4e-142	0.9886148007590133

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033189	internalin_A	1.31e-09	1518	1687	567	737	class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.
pfam09479	Flg_new	5.32e-08	1579	1653	1	65	Listeria-Bacteroides repeat domain (List_Bact_rpt). This model describes a conserved core region of about 43 residues, which occurs in at least two families of tandem repeats. These include 78-residue repeats which occur from 2 to 15 times in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats found in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few other bacteria.
NF033188	internalin_H	1.46e-07	1514	1661	342	487	InlH/InlC2 family class 1 internalin. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin H (InlH), or internalin C2, two class 1 (LPXTG-type) internalins that are closely related, one apparently derived from the other through a recombination event.
pfam13229	Beta_helix	5.74e-07	376	522	1	147	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
NF033189	internalin_A	5.29e-05	1515	1706	494	699	class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGQ95106.1	2.31e-121	47	676	29	661
QGQ95096.1	2.01e-103	147	679	3	540
QUH29212.1	9.57e-95	40	642	386	957
BBH24245.1	1.97e-92	42	714	28	661
QXE38906.1	5.04e-88	46	687	37	639

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQP_A	6.77e-53	46	677	26	623	Glycosidehydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_B Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_C Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_D Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_E Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_F Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_G Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_H Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000293	0.999035	0.000156	0.000183	0.000157	0.000139

TMHMM  Annotations     

start	end
13	35