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CAZyme Information: MGYG000000284_01299

You are here: Home > Sequence: MGYG000000284_01299

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp900540715
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900540715
CAZyme ID MGYG000000284_01299
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
464 MGYG000000284_13|CGC1 51026.25 6.9232
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000284 5935659 MAG Sweden Europe
Gene Location Start: 85452;  End: 86846  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000284_01299.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 62 303 1.1e-68 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 4.40e-101 28 417 42 446
Probable beta-xylosidase; Provisional
COG1472 BglX 6.28e-78 62 412 55 372
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK15098 PRK15098 1.38e-73 5 400 2 417
beta-glucosidase BglX.
pfam00933 Glyco_hydro_3 3.75e-53 64 336 63 316
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 3.40e-10 376 419 1 43
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDO67855.1 1.06e-229 1 419 1 419
ALJ59400.1 1.43e-227 1 419 1 419
QUT89559.1 1.43e-227 1 419 1 419
ALJ40805.1 4.50e-226 1 419 4 421
QIU96996.1 1.28e-225 2 419 5 421

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 2.34e-72 38 413 25 409
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 2.34e-72 38 413 25 409
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
6Q7I_A 2.67e-60 30 431 44 449
GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
5A7M_A 2.94e-60 30 413 44 431
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
5AE6_A 2.98e-60 30 413 44 431
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q94KD8 1.76e-92 22 413 38 435
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9LXD6 1.36e-86 35 415 56 445
Beta-D-xylosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BXL3 PE=1 SV=1
A5JTQ3 2.72e-86 28 415 54 450
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1
A5JTQ2 3.81e-86 6 415 37 450
Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1
D5EY15 1.33e-85 4 415 3 415
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000451 0.998727 0.000291 0.000170 0.000170 0.000159

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000284_01299.