CAZyme Information: MGYG000000284_00445

Basic Information

• Species: Parabacteroides sp900540715
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900540715
• CAZyme ID: MGYG000000284_00445
• CAZy Family: GH30
• CAZyme Description: Glucuronoxylanase XynC

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
504	MGYG000000284_4|CGC2	56222.89	4.655

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000284	5935659	MAG	Sweden	Europe

• Gene Location: Start: 63823; End: 65337 Strand: -

Full Sequence      

MKTPRKLTLGLFACLFLLGACTDSEMVDQKAGGSLATKAVANTDVILHWNTEEQNIDGFG
VAQAGWADYLYAHRKRDTVLDLMFGKDGLHLNILRGEIYSHYWKNEGDTSFHLDEEIDMP
LDDPFFDIDYSADGNEAAEEIAQRKGQLWINQRVKALYDVDKFVYSVWSPPAYMKSNDSD
SKGNLKSAYYQKFADYLSAFCDAYSSVGLKPYAISPANEPEYAASWSSCLWLPGTTTLGR
FIVNNMGPTFAANHPDVKIIFGENAQWTGILGFIMGSKNYVRDILNVNTRITNYPIIAAG
HGYVDPVTKKDPGIEPFTKAESKNIPVWLTEISDPNNSYTTSIDDGLNWAVKFHRYLCEA
NVSSIIWWAGALPDSGTNEGLIYINKENRTDYETGKRYETFGNFTRYIPVGSTRISAEYN
SDQGYMVSGYKKGNNFTIVAINTNDTETTIDLALDNNQTASPLAGYLTDATHKWETLETI
QPVGNTYMITLPAKSVVTFTGNVE

Enzyme Prediction     

No EC number prediction in MGYG000000284_00445.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH30	45	498	6.2e-175	0.9933333333333333

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5520	XynC	1.05e-31	1	504	1	431	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam14587	Glyco_hydr_30_2	7.05e-17	51	383	10	367	O-Glycosyl hydrolase family 30.
pfam02055	Glyco_hydro_30	9.97e-07	77	349	25	278	Glycosyl hydrolase family 30 TIM-barrel domain.
pfam17189	Glyco_hydro_30C	0.005	411	499	1	63	Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QQY39420.1	4.90e-236	13	503	15	498
ABR38295.1	4.90e-236	13	503	15	498
QEW35102.1	9.86e-236	13	503	15	498
QQY42684.1	9.86e-236	13	503	15	498
QUT56392.1	3.26e-234	13	503	15	498

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5CXP_A	8.91e-26	40	502	1	388	X-raycrystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824]
4QAW_A	9.31e-25	166	504	82	391	Structureof modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_B Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_C Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_D Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_E Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_F Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_G Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_H Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis]
4FMV_A	2.74e-24	166	502	86	387	CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]
3GTN_A	5.32e-24	166	502	83	390	CrystalStructure of XynC from Bacillus subtilis 168 [Bacillus subtilis],3GTN_B Crystal Structure of XynC from Bacillus subtilis 168 [Bacillus subtilis],3KL0_A Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis [Bacillus subtilis subsp. subtilis str. 168],3KL0_B Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis [Bacillus subtilis subsp. subtilis str. 168],3KL0_C Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis [Bacillus subtilis subsp. subtilis str. 168],3KL0_D Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis [Bacillus subtilis subsp. subtilis str. 168],3KL3_A Crystal structure of Ligand bound XynC [Bacillus subtilis subsp. subtilis str. 168],3KL3_B Crystal structure of Ligand bound XynC [Bacillus subtilis subsp. subtilis str. 168],3KL3_C Crystal structure of Ligand bound XynC [Bacillus subtilis subsp. subtilis str. 168],3KL3_D Crystal structure of Ligand bound XynC [Bacillus subtilis subsp. subtilis str. 168],3KL5_A Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate Ligand Complexes Reveal this Family of Enzymes Unique Mechanism of Substrate Specificity and Recognition [Bacillus subtilis],3KL5_B Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate Ligand Complexes Reveal this Family of Enzymes Unique Mechanism of Substrate Specificity and Recognition [Bacillus subtilis],3KL5_C Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate Ligand Complexes Reveal this Family of Enzymes Unique Mechanism of Substrate Specificity and Recognition [Bacillus subtilis],3KL5_D Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate Ligand Complexes Reveal this Family of Enzymes Unique Mechanism of Substrate Specificity and Recognition [Bacillus subtilis]
6M5Z_A	2.38e-22	45	499	25	451	ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q45070	7.22e-25	33	502	24	421	Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
Q6YK37	9.11e-23	166	499	115	419	Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2
Q9UB00	3.02e-07	37	284	80	330	Putative glucosylceramidase 4 OS=Caenorhabditis elegans OX=6239 GN=gba-4 PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	1.000051	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000284_00445.