CAZyme Information: MGYG000000284_00240

Basic Information

• Species: Parabacteroides sp900540715
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900540715
• CAZyme ID: MGYG000000284_00240
• CAZy Family: GH146
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
681	MGYG000000284_2|CGC5	78083.73	5.7188

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000284	5935659	MAG	Sweden	Europe

• Gene Location: Start: 96386; End: 98431 Strand: +

Full Sequence      

MTMNKLIKIFFASFATFAIASAAPAGGESMSGNYLNNRQPLLQKTYIELPLGSIKAEGWI
QEQLVRMKNGMTGHLDEVYEKVMGLRNGWLGGDGDVWERGPYWIDGLLPLAYILNDQALI
EKVKPWIEWTLASQKPNGYFGPDTDRSYEPGLQRDNAQDWWPKMVMLKIMQQYYTATNDT
RVIGFLTNYFKYQLAELPKNPLGKWTFWGEQRGGDNLMIVYWLYNITGDKFLLDLGELIH
KQTFNWTDIFLNQDHLSRQHSLHCVNLAQGFKEPIVYYQQNKDPKQIQATKKAVHDIHNT
IGLPTGLWGGDELLRFGKPTAGSELCTAVEMMYSLEEMLEITGDIQWADYLERVTYNALP
TQVTDDYSGRQYYQQTNQVAVTRDWREFSTPHEDTDILFGELTGYPCCTSNLHQGWPKFV
QNLWYATADNGIAALVYAPSQVSAKVANGITVNIKEETAYPFEETIRFNISFADKKVKQA
FFPFHIRIPAWCKNPVVKLNGEPVTIDAYPGTVARVNREWKNGDVLSVELPMEVVVSRWY
DNSAVVERGPLVYALKMNEKWEKKTFENEKAGEYGKWYYEVTSDSPWNYALLHRSFSPEQ
IKTSFTVEKSSVVPIYPWNVENAPIRIKTKAKRVNNWTLVRGSAGPVPFFTQQGNDVGEE
ETIELIPYGCTTLRITEFPVR

Enzyme Prediction     

No EC number prediction in MGYG000000284_00240.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH146	180	554	6e-38	0.7037773359840954

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	5.70e-70	87	554	51	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.98e-30	320	619	288	574	Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATP55412.1	3.87e-160	1	680	1	650
ALL07583.1	4.63e-158	31	680	25	650
AMP98056.1	1.76e-154	34	680	28	650
QNN43859.1	3.21e-154	37	680	29	648
ACU60445.1	6.55e-154	37	680	31	650

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQO_A	7.82e-25	223	555	310	608	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
4QJY_A	2.12e-19	103	555	82	561	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	1.06e-17	103	555	82	561	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
6EX6_A	1.78e-13	93	553	69	544	TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
3WRE_A	1.81e-10	320	553	334	565	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	9.91e-10	320	553	334	565	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000222	0.999142	0.000159	0.000167	0.000155	0.000138

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000284_00240.