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CAZyme Information: MGYG000000265_03258

You are here: Home > Sequence: MGYG000000265_03258

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides nordii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides nordii
CAZyme ID MGYG000000265_03258
CAZy Family GH105
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
662 MGYG000000265_17|CGC1 74874.48 7.1649
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000265 5489209 Isolate China Asia
Gene Location Start: 15089;  End: 17077  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000265_03258.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 50 378 3.3e-84 0.9518072289156626

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4225 YesR 8.58e-83 30 362 12 334
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470 Glyco_hydro_88 5.28e-74 29 377 1 335
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
pfam05935 Arylsulfotrans 0.001 506 586 45 138
Arylsulfotransferase (ASST). This family consists of several bacterial Arylsulfotransferase proteins. Arylsulfotransferase (ASST) transfers a sulfate group from phenolic sulfate esters to a phenolic acceptor substrate.
pfam13360 PQQ_2 0.001 410 585 51 231
PQQ-like domain. This domain contains several repeats of the PQQ repeat.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWI10254.1 3.85e-116 26 386 41 410
QMW80470.1 7.61e-105 29 382 6 358
QIB56756.1 7.61e-105 29 382 6 358
QDO71120.1 3.81e-92 22 382 72 429
ALJ58448.1 4.13e-91 22 382 72 429

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1NC5_A 6.18e-74 24 377 11 360
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 2.48e-73 24 377 1 350
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
4WU0_A 6.38e-65 52 382 23 359
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
3NO2_A 7.41e-15 413 648 26 264
Crystalstructure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution [Bacteroides caccae ATCC 43185]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 3.38e-73 24 377 11 360
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6 4.34e-24 161 327 1 163
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 4.34e-24 161 327 1 163
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000196 0.999190 0.000147 0.000155 0.000139 0.000132

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000265_03258.