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CAZyme Information: MGYG000000265_00692

You are here: Home > Sequence: MGYG000000265_00692

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides nordii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides nordii
CAZyme ID MGYG000000265_00692
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
575 MGYG000000265_2|CGC6 64242.73 8.2529
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000265 5489209 Isolate China Asia
Gene Location Start: 202085;  End: 203812  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000265_00692.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 273 545 2.1e-101 0.9444444444444444
CE12 26 257 1.6e-78 0.9952380952380953

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02773 PLN02773 6.55e-89 275 545 9 284
pectinesterase
cd01821 Rhamnogalacturan_acetylesterase_like 4.20e-86 26 257 2 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
pfam01095 Pectinesterase 2.12e-76 272 536 1 271
Pectinesterase.
PLN02682 PLN02682 6.98e-75 271 543 69 347
pectinesterase family protein
PLN02432 PLN02432 1.22e-71 275 561 15 291
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT77879.1 0.0 1 575 1 575
QUT69790.1 0.0 1 575 8 582
QUT41965.1 0.0 1 566 8 573
QQA07818.1 0.0 1 566 1 566
ALJ61265.1 0.0 1 575 1 588

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 2.28e-47 272 563 8 298
Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A 1.08e-43 272 536 4 274
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 1.27e-37 241 552 6 350
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
2NSP_A 1.64e-34 271 563 4 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
5C1E_A 2.38e-31 281 536 17 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 4.94e-64 275 543 9 282
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q8VYZ3 1.59e-54 277 543 90 361
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
Q9SIJ9 4.00e-50 275 561 53 331
Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1
Q9FM79 4.08e-47 274 561 83 377
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
P83218 1.25e-46 272 563 8 298
Pectinesterase OS=Daucus carota OX=4039 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001182 0.263149 0.735332 0.000110 0.000113 0.000103

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000265_00692.