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CAZyme Information: MGYG000000254_00169

You are here: Home > Sequence: MGYG000000254_00169

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Odoribacter splanchnicus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Odoribacter; Odoribacter splanchnicus
CAZyme ID MGYG000000254_00169
CAZy Family CBM62
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
644 MGYG000000254_1|CGC3 74294.62 6.5119
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000254 4496971 Isolate China Asia
Gene Location Start: 214237;  End: 216171  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000254_00169.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM62 444 508 4.7e-17 0.5038167938931297
CBM62 516 576 3.4e-16 0.4580152671755725

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 0.003 529 578 9 59
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SNV39489.1 0.0 1 644 1 644
QUT74079.1 4.94e-180 15 644 17 648
ABR45148.1 1.46e-179 22 644 25 660
QCY54736.1 1.46e-179 22 644 25 660
QRO14748.1 1.46e-179 22 644 25 660

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2YB7_A 1.30e-11 515 587 7 80
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YB7_B Chain B, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YFU_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YFZ_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YG0_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
5G56_A 5.71e-10 515 587 708 781
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.073882 0.386462 0.537750 0.000660 0.000518 0.000702

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000254_00169.