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CAZyme Information: MGYG000000202_00260

You are here: Home > Sequence: MGYG000000202_00260

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species AF33-28 sp003477885
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; AF33-28; AF33-28 sp003477885
CAZyme ID MGYG000000202_00260
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
626 MGYG000000202_1|CGC8 69426.35 4.4087
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000202 5162288 Isolate China Asia
Gene Location Start: 315721;  End: 317601  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000202_00260.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 31 468 3.4e-136 0.9978070175438597
CBM13 528 624 9.6e-18 0.5

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 5.09e-29 30 341 3 356
O-Glycosyl hydrolase family 30.
COG5520 XynC 5.31e-22 14 471 18 429
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam14200 RicinB_lectin_2 1.94e-21 523 610 2 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 7.15e-14 569 623 1 55
Ricin-type beta-trefoil lectin domain-like.
cd00161 RICIN 9.10e-12 487 622 1 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QLG42765.1 5.50e-132 31 477 19 466
QZN75685.1 8.40e-131 31 474 50 494
APO48420.1 8.73e-131 31 474 19 463
AWB44606.1 2.06e-129 28 473 41 487
QOS82337.1 7.80e-129 31 477 19 466

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 9.69e-16 33 382 10 406
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
4CKQ_A 1.04e-13 130 469 92 409
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQ9_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQB_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQC_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQD_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQE_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
4UQA_A 2.46e-13 130 469 92 409
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
5A6L_A 4.36e-13 130 469 92 409
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],5A6M_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus ATCC 27405]
4QAW_A 9.36e-13 130 471 72 389
Structureof modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_B Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_C Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_D Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_E Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_F Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_G Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4QAW_H Structure of modular Xyn30D from Paenibacillus barcinonensis [Paenibacillus barcinonensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q76FP5 1.53e-47 11 473 4 476
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
A0A401ETL2 8.49e-25 30 528 38 695
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1
Q45070 1.35e-10 158 471 127 421
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
Q6YK37 1.30e-09 130 470 105 421
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000282 0.998293 0.000822 0.000219 0.000204 0.000165

TMHMM  Annotations      download full data without filtering help

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