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CAZyme Information: MGYG000000169_01972

You are here: Home > Sequence: MGYG000000169_01972

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_G sp000432355
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_G; Eubacterium_G sp000432355
CAZyme ID MGYG000000169_01972
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
535 MGYG000000169_8|CGC3 58928.07 4.7313
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000169 2836880 Isolate China Asia
Gene Location Start: 93608;  End: 95215  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000169_01972.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 246 523 7.3e-37 0.7938461538461539

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02793 PLN02793 4.91e-06 247 370 140 266
Probable polygalacturonase
pfam00295 Glyco_hydro_28 5.60e-06 283 437 88 238
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
COG5434 Pgu1 1.31e-04 205 459 150 418
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 1.51e-04 258 370 141 246
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX43664.1 2.08e-210 56 534 40 518
BCK00431.1 1.51e-193 27 534 8 520
ACK41503.1 1.17e-136 49 514 21 464
ACI19833.1 2.92e-134 60 514 32 464
QTE67472.1 2.71e-119 61 526 33 478

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.980733 0.007210 0.003398 0.000063 0.000035 0.008596

TMHMM  Annotations      download full data without filtering help

start end
20 42