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CAZyme Information: MGYG000000152_01782
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lacrimispora sp902363835 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora; Lacrimispora sp902363835 | |||||||||||
| CAZyme ID | MGYG000000152_01782 | |||||||||||
| CAZy Family | PL17 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 263353; End: 265350 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL17 | 375 | 506 | 1.1e-46 | 0.9777777777777777 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam07940 | Hepar_II_III | 2.60e-07 | 371 | 485 | 9 | 131 | Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin. |
| pfam16889 | Hepar_II_III_N | 3.90e-04 | 104 | 314 | 110 | 324 | Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain. |
| PRK06266 | PRK06266 | 5.47e-04 | 50 | 88 | 116 | 152 | transcription initiation factor E subunit alpha; Validated |
| TIGR00373 | TIGR00373 | 0.001 | 49 | 77 | 107 | 135 | transcription factor E. This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain. [Transcription, Transcription factors] |
| COG1675 | TFA1 | 0.007 | 8 | 88 | 82 | 148 | Transcription initiation factor IIE, alpha subunit [Transcription]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRV20012.1 | 0.0 | 1 | 665 | 1 | 665 |
| ADL05862.1 | 0.0 | 1 | 665 | 1 | 665 |
| SET91754.1 | 0.0 | 1 | 665 | 1 | 665 |
| BAR73165.1 | 0.0 | 1 | 655 | 1 | 656 |
| AVM69429.1 | 2.73e-252 | 1 | 653 | 1 | 653 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7BJT_A | 1.37e-19 | 94 | 420 | 87 | 451 | ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BJT_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans] |
| 7BM6_A | 4.19e-19 | 94 | 420 | 87 | 451 | ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BM6_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans] |
| 4NEI_A | 1.65e-18 | 94 | 603 | 89 | 631 | Alg17cPL17 Family Alginate Lyase [Saccharophagus degradans 2-40],4NEI_B Alg17c PL17 Family Alginate Lyase [Saccharophagus degradans 2-40] |
| 4OJZ_A | 5.02e-18 | 94 | 603 | 89 | 631 | CrystalStructure of Alg17c Mutant Y258A Complexed with Alginate Trisaccharide [Saccharophagus degradans 2-40],4OJZ_B Crystal Structure of Alg17c Mutant Y258A Complexed with Alginate Trisaccharide [Saccharophagus degradans 2-40],4OK2_A Crystal Structure of Alg17c Mutant Y258A [Saccharophagus degradans 2-40],4OK2_B Crystal Structure of Alg17c Mutant Y258A [Saccharophagus degradans 2-40] |
| 4OK4_A | 3.51e-17 | 94 | 603 | 89 | 631 | CrystalStructure of Alg17c Mutant H202L [Saccharophagus degradans 2-40],4OK4_B Crystal Structure of Alg17c Mutant H202L [Saccharophagus degradans 2-40] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q21FJ0 | 9.03e-18 | 94 | 603 | 89 | 631 | Exo-oligoalginate lyase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=alg17C PE=1 SV=1 |
| B2FSW8 | 2.10e-17 | 94 | 614 | 96 | 641 | Alginate lyase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=Smlt2602 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000067 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |