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CAZyme Information: MGYG000000125_02384

You are here: Home > Sequence: MGYG000000125_02384

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_B tyrobutyricum
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_B; Clostridium_B tyrobutyricum
CAZyme ID MGYG000000125_02384
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
497 55134.49 8.8452
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000125 3256597 Isolate Canada North America
Gene Location Start: 6992;  End: 8485  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000125_02384.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 346 479 1.1e-23 0.9765625

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 9.45e-74 259 495 21 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 2.91e-21 335 474 2 136
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam13205 Big_5 4.86e-08 34 122 18 105
Bacterial Ig-like domain.
pfam01832 Glucosaminidase 1.26e-07 346 398 1 45
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANP68148.1 0.0 1 497 1 497
AND83343.1 0.0 1 497 1 497
QNB67506.1 0.0 1 497 1 497
QXE19408.1 6.70e-177 1 495 1 497
ALU36640.1 9.49e-177 1 495 1 497

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 8.85e-44 295 495 40 243
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6FXP_A 6.26e-42 254 467 11 219
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 7.16e-42 254 467 41 249
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
4PI7_A 2.79e-31 317 467 55 201
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 1.93e-30 317 467 55 201
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 5.28e-54 295 495 682 879
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q8NX96 2.20e-39 295 495 1052 1255
Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1
Q6GAG0 2.20e-39 295 495 1046 1249
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1
Q931U5 2.96e-39 295 495 1044 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
Q5HH31 2.96e-39 295 495 1052 1255
Bifunctional autolysin OS=Staphylococcus aureus (strain COL) OX=93062 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000266 0.998950 0.000242 0.000180 0.000178 0.000156

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000125_02384.