logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000105_03273

You are here: Home > Sequence: MGYG000000105_03273

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides clarus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides clarus
CAZyme ID MGYG000000105_03273
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
561 MGYG000000105_7|CGC1 65665.66 5.0755
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000105 3966085 Isolate Canada North America
Gene Location Start: 43405;  End: 45090  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000105_03273.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 143 409 1.7e-23 0.7272727272727273

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16586 DUF5060 8.78e-07 33 105 3 68
Domain of unknown function (DUF5060). This is the N-terminal domain of a putative glycoside hydrolase, DUF4038. It is found in a number of different bacterial orders.
COG3934 COG3934 4.22e-04 185 338 32 175
Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADF53794.1 2.53e-221 35 556 11 528
QRQ60221.1 3.58e-210 37 556 36 555
QQT60502.1 4.09e-210 42 556 5 519
QQT46981.1 7.20e-210 37 556 36 555
QQL50920.1 8.59e-202 20 494 22 496

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B833 2.75e-07 178 396 66 314
Mannan endo-1,4-beta-mannosidase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=manB PE=1 SV=2
Q5AZ53 1.16e-06 267 396 159 315
Mannan endo-1,4-beta-mannosidase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=manC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001748 0.997060 0.000551 0.000207 0.000201 0.000199

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000105_03273.