CAZyme Information: MGYG000000105_02411

Basic Information

• Species: Bacteroides clarus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides clarus
• CAZyme ID: MGYG000000105_02411
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
849	MGYG000000105_4|CGC10	97819.91	8.9071

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000105	3966085	Isolate	Canada	North America

• Gene Location: Start: 465604; End: 468153 Strand: -

Full Sequence      

MKKQFIRQWTLLLLFALAITPAALAQKTGLERVHENVRVTPYPQQDNPLYLNPSPLIVPV
EMRKADYLEFQLSQEQTFPKGKTLQSKPLAWCMFNPHRVLENGTWYWRFRSVDKAGKAGE
WSATYNFSVSEDIPQFVTPTFDAFMKNMPKGYPRIYCFLEEGLKKAKGNIQTSPEYKDLT
NRAQRALNNNYETHPTPYKAANLMGQDANQLYTAYRATGEQRYADKMLAYTRALLASTPD
PKLINDFYCGDVLFLLTHTYDACYDRLNREELQKIEDLTFQIAKYHHNVQRKGRVENHIF
DNHYWQRAYREMLQIGLMFADKNDTAKEILEYCYELWTARAPASGFNRDGEWHNGQGYFH
SNVKTLWYVPSLMSYVTGTDFLQHPFYKNLGKALVYAWPPRSMSAGFGDGNESFNYVSRQ
RAALADYIARETGDPYAIWYCNENKTATADMDMRIYRIASADKIYPAGTPLPEDAPKALW
MQDTGEMLAHSNLKRYRENTFLSFRSSPFGSGSHTLSDQNSFNLHFRGVPVYRSTGYYLH
FSDPHNLLSYRHTRAHNTILVDGIGQPFTTRAYGKLVRMLSGENISYACGDASNAYCGLT
DYPMWQKNFKNAKVEESVANGFGETPLKKYRRHILLLHPNIVVIYDELEAGKPVRWDWLL
HSPVQFKFDENGKDKILTTYYPEKKFTSIARIFSNSDCKLSQTDRFFSAPDPKKMRKGRE
YPNQWHMTAAYEKSAANRILTVITLQPDGAKPLNVIHDKNGNPNDFVLAGKWKLRAQLDP
SQPAELLIRDPKTGVLFSLGNKTLQIEGENYKREPGTSVLFDVMDGKWTIHEMSDIEPMP
TGKLHHDQP

Enzyme Prediction     

No EC number prediction in MGYG000000105_02411.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	493	648	6.9e-48	0.9776119402985075

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	8.13e-74	31	450	1	454	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	8.38e-13	488	673	9	177	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ49807.1	0.0	1	844	1	833
QUT44273.1	3.16e-311	56	844	1	785
QRQ48971.1	4.75e-293	29	843	14	825
QUT44689.1	1.92e-292	29	843	14	825
QIU94214.1	2.50e-257	20	841	36	845

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	1.56e-114	1	840	1	866	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	8.85e-112	1	840	1	866	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	1.91e-37	71	662	56	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	3.29e-36	71	662	56	661	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000598	0.998497	0.000319	0.000200	0.000182	0.000167

TMHMM  Annotations     

start	end
5	24