CAZyme Information: MGYG000000105_02400

Basic Information

• Species: Bacteroides clarus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides clarus
• CAZyme ID: MGYG000000105_02400
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
835	MGYG000000105_4|CGC9	96612.9	8.7235

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000105	3966085	Isolate	Canada	North America

• Gene Location: Start: 439039; End: 441546 Strand: -

Full Sequence      

MKKQLLLFLTFCLIPLSIQAENIQRIHENERETPYPQQEHTLYINPSPLLVPKSVKQSDF
LQFNLSRSKDFSDASTVLSQPKPWCMFNPHKVLENGTWYWRVRSVSKEGKEFSWSKTYSF
TVTDDIPRFVTPEANVFLSSIPQAYPRIYCFLNDNLEKARRKVHSHPEFENMITDSRNAL
GSNYTNDTKPYRQITRMAVECDNLNTAYQMLQLDVYAEKMVQNVRCLLAVEPDKKVIGND
FNAGELIYTLACTYENCYDRFSSQERKQIESIIMDVLSLYYKSHILENEETHIFDNHFWQ
FAFRHFMQAALVMYDKYPLAKEYLEYSYELWTARAPASGFNRDGSWHNGTSYFSANAVTL
SYVPALFGYLTKTDFMQHPWYKNAGIGMLYSWQPRALSAGFGDGHEKNNGKPLRIRSAFA
DFMARTTEDPYAAWYSSINNRYKTESETRLYRMACGKQRPRQAELPADAPKAVWFKDTGE
MIANSDLKDYKHNISLSFRSSPFGSGSHTHSNQNAFNLHYGGKAIYHAVGHYMNFSDPHN
LLSYRHTRAHNTLLIDGIGQPFTTRAYGNIVRMFNGEHVSYALGDASNAYCGISEYPMWQ
KNFAGHNLEQSRENGFGETPLKKYRRHIFLLHPNIVVIYDELEATKAVSWDWLLHSPVKF
QIDETTSTLTTRNKKDKYISVARLFSEQKCTISQTDKFVAEPNRKIGVRGEDFTAPWSLT
ASYEPGKANRILTIIQVEANENRIVNIERSGNNSFQCGDWKIEAELNTKRPASLYIWNRK
TQSTFSYGKNRPVINGKVYENKRKDSSILYDSFNGTWEIREMRDSPALYTGGIQK

Enzyme Prediction     

No EC number prediction in MGYG000000105_02400.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	486	642	3.3e-50	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	4.43e-83	24	436	1	445	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	4.76e-08	467	655	1	163	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ49807.1	0.0	1	834	1	834
QUT44273.1	0.0	49	834	1	786
QUT44689.1	0.0	16	824	8	817
QRQ48971.1	0.0	16	824	8	817
QIU94214.1	1.91e-258	31	835	49	850

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	3.12e-113	1	806	1	862	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	1.77e-110	1	806	1	862	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	1.43e-31	65	656	57	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	2.38e-30	65	656	57	661	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000244	0.999104	0.000180	0.000164	0.000152	0.000142

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000105_02400.