CAZyme Information: MGYG000000084_01674

Basic Information

• Species: Gemmiger formicilis
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger formicilis
• CAZyme ID: MGYG000000084_01674
• CAZy Family: GH125
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
595	MGYG000000084_5|CGC4	66672.29	4.6201

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000084	3006488	Isolate	United Kingdom	Europe

• Gene Location: Start: 223606; End: 225393 Strand: -

Full Sequence      

MDKYLPTGNDFVSLPRINERTGGIEDITFLYMAAKGLIDIRGSESTPLIQPYVHLNGVGS
LSPAHLAWTRLDDWLPQSTAQLGSLELKTLYIPPIEERGFAIQMTVHNTSESAQDVVIGL
NGCWASSWHCVNEDKPLSGKATCFRSGWNSSLIFEYHAGFPMFSFAPMADAQTDSSFTCS
DDGSITYDLSHHCTIAADGTASVVFYWGLGFEEVAAATSAKEMLRQTFDAELTKTRAWLQ
ERRVTFNGDAKLTQLYNTNLFFCMFFSTGITLDTEELVLVTSRSPRYYVSAAYWDRDSLL
WSFPAILDADSERAKEMLSYVFGRQRRNFGIHSRYIDGTVLEPGFELDELVAPLLALERY
INKTDDKSILNDPDIVQGISLILNRLRQHEAASCRLYDTFLQPTDDEHVYPYITYDNVLV
WKALKDLAQLAPQYAHLEKTASEIKDAIMTHCVQKDAEGKPYFGWSIDLNGSHDVYDEPP
GSLQLLPLFDFCSPTDEIYRNTVAMIRSPEYKYSFANSPINEIGCPHAPHPWILSLANSL
LCGRVEHCRAILEKISMDNGIACESVDEVTGYCTTGEAFATCAGFLCHSIREALL

Enzyme Prediction     

No EC number prediction in MGYG000000084_01674.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH125	398	588	1.9e-16	0.5074626865671642

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam06824	Glyco_hydro_125	6.87e-16	331	537	108	358	Metal-independent alpha-mannosidase (GH125). This family, which contains bacterial and fungal glycoside hydrolases, is also known as GH125. They function as metal-independent alpha-mannosidases, with specificity for alpha-1,6-linked non-reducing terminal mannose residues. Structurally this family is part of the 6 hairpin glycosidase superfamily.
COG3538	COG3538	1.44e-15	340	537	127	362	Meiotically up-regulated gene 157 (Mug157) protein (function unknown) [Function unknown].
COG3387	SGA1	7.33e-06	410	506	412	507	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QEY34932.1	3.14e-272	2	593	3	590
QKN24824.1	4.30e-271	5	593	1	585
ARP51233.1	4.30e-271	5	593	1	585
QKO31192.1	4.30e-271	5	593	1	585
QIA31705.1	3.72e-244	4	594	5	592

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000050	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000084_01674.