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CAZyme Information: MGYG000000078_01581
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnospira rogosae_A | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira rogosae_A | |||||||||||
| CAZyme ID | MGYG000000078_01581 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 352005; End: 360374 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 2.22e-76 | 1420 | 1941 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 1.57e-26 | 2040 | 2271 | 401 | 635 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG0827 | YtxK | 1.09e-10 | 1269 | 1397 | 219 | 341 | Adenine-specific DNA methylase [Replication, recombination and repair]. |
| cd18011 | DEXDc_RapA | 5.27e-09 | 1887 | 1946 | 1 | 62 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| smart00487 | DEXDc | 7.70e-09 | 1885 | 1988 | 7 | 110 | DEAD-like helicases superfamily. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 0.0 | 1131 | 2639 | 1556 | 3151 |
| QIW86704.1 | 0.0 | 1131 | 2639 | 1624 | 3219 |
| QIW86628.1 | 0.0 | 1131 | 2639 | 1624 | 3219 |
| AEY69616.1 | 1.03e-318 | 1120 | 2675 | 1689 | 3330 |
| AXF51455.1 | 6.07e-318 | 1120 | 2675 | 1782 | 3423 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 8.07e-35 | 1117 | 2499 | 23 | 1619 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000076 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |