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CAZyme Information: MGYG000000076_02195
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Roseburia intestinalis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia intestinalis | |||||||||||
| CAZyme ID | MGYG000000076_02195 | |||||||||||
| CAZy Family | CBM27 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 17426; End: 21334 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH26 | 389 | 704 | 1.8e-56 | 0.834983498349835 |
| CBM23 | 885 | 1052 | 4.5e-51 | 0.9938271604938271 |
| CBM27 | 195 | 354 | 1.6e-38 | 0.9880952380952381 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02156 | Glyco_hydro_26 | 9.74e-31 | 389 | 635 | 2 | 230 | Glycosyl hydrolase family 26. |
| COG4124 | ManB2 | 1.04e-16 | 513 | 677 | 137 | 296 | Beta-mannanase [Carbohydrate transport and metabolism]. |
| COG3401 | FN3 | 9.31e-12 | 1132 | 1289 | 179 | 333 | Fibronectin type 3 domain [General function prediction only]. |
| cd00063 | FN3 | 1.98e-07 | 1130 | 1208 | 13 | 93 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| smart00060 | FN3 | 5.51e-06 | 1121 | 1192 | 4 | 81 | Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VCV20359.1 | 0.0 | 1 | 1302 | 1 | 1308 |
| CBL14297.1 | 0.0 | 1 | 1302 | 1 | 1308 |
| CBL07467.1 | 0.0 | 1 | 1302 | 1 | 1314 |
| EEV00397.1 | 0.0 | 20 | 1302 | 32 | 1320 |
| CBK83362.1 | 1.05e-299 | 34 | 1075 | 388 | 1447 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4YN5_A | 2.07e-51 | 387 | 766 | 51 | 424 | Catalyticdomain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase [Bacillus sp. JAMB750] |
| 1J9Y_A | 8.58e-46 | 382 | 759 | 6 | 369 | Crystalstructure of mannanase 26A from Pseudomonas cellulosa [Cellvibrio japonicus] |
| 1R7O_A | 1.09e-45 | 382 | 759 | 16 | 379 | CrystalStructure of apo-mannanase 26A from Psudomonas cellulosa [Cellvibrio japonicus] |
| 2WHM_A | 3.92e-45 | 382 | 759 | 6 | 369 | Cellvibriojaponicus Man26A E121A and E320G double mutant in complex with mannobiose [Cellvibrio japonicus] |
| 1GW1_A | 4.29e-45 | 382 | 759 | 2 | 362 | Substratedistortion by beta-mannanase from Pseudomonas cellulosa [Cellvibrio japonicus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A1A278 | 5.29e-47 | 385 | 1018 | 40 | 651 | Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1 |
| P49424 | 1.13e-44 | 382 | 759 | 44 | 407 | Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2 |
| Q5AWB7 | 3.76e-18 | 448 | 686 | 68 | 311 | Probable mannan endo-1,4-beta-mannosidase E OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=manE PE=3 SV=1 |
| G2Q4H7 | 4.02e-12 | 386 | 635 | 173 | 394 | Mannan endo-1,4-beta-mannosidase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Man26A PE=1 SV=1 |
| P49425 | 1.14e-11 | 338 | 637 | 99 | 379 | Mannan endo-1,4-beta-mannosidase OS=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) OX=518766 GN=manA PE=1 SV=3 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000774 | 0.998176 | 0.000334 | 0.000256 | 0.000222 | 0.000206 |
