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CAZyme Information: MGYG000000071_02503
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudoflavonifractor capillosus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Pseudoflavonifractor; Pseudoflavonifractor capillosus | |||||||||||
| CAZyme ID | MGYG000000071_02503 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | DNA mismatch repair protein MutS | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 24756; End: 32249 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 1.26e-68 | 1199 | 1725 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| pfam18824 | LPD11 | 7.16e-34 | 534 | 600 | 1 | 69 | Large polyvalent protein-associated domain 11. This is an alpha-helical domain with conserved hydrophobic residues. It is found in polyvalent proteins of conjugative elements. |
| COG4646 | COG4646 | 2.98e-27 | 1868 | 2057 | 441 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| pfam01624 | MutS_I | 5.15e-23 | 357 | 423 | 1 | 69 | MutS domain I. This domain is found in proteins of the MutS family (DNA mismatch repair proteins) and is found associated with pfam00488, pfam05188, pfam05192 and pfam05190. The MutS family of proteins is named after the Salmonella typhimurium MutS protein involved in mismatch repair; other members of the family included the eukaryotic MSH 1,2,3, 4,5 and 6 proteins. These have various roles in DNA repair and recombination. Human MSH has been implicated in non-polyposis colorectal carcinoma (HNPCC) and is a mismatch binding protein. The aligned region corresponds with globular domain I, which is involved in DNA binding, in Thermus aquaticus MutS as characterized in. |
| COG0249 | MutS | 3.45e-17 | 357 | 423 | 7 | 70 | DNA mismatch repair ATPase MutS [Replication, recombination and repair]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 0.0 | 908 | 2414 | 1549 | 3142 |
| QIW86704.1 | 0.0 | 883 | 2414 | 1594 | 3210 |
| QIW86628.1 | 0.0 | 883 | 2414 | 1594 | 3210 |
| AEY69616.1 | 2.17e-310 | 914 | 2416 | 1696 | 3288 |
| AXF51455.1 | 4.68e-308 | 914 | 2483 | 1789 | 3447 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1NNE_A | 8.02e-10 | 352 | 427 | 8 | 85 | CrystalStructure of the MutS-ADPBeF3-DNA complex [Thermus aquaticus],1NNE_B Crystal Structure of the MutS-ADPBeF3-DNA complex [Thermus aquaticus] |
| 1EWQ_A | 4.09e-09 | 352 | 427 | 8 | 85 | ChainA, DNA MISMATCH REPAIR PROTEIN MUTS [Thermus aquaticus],1EWQ_B Chain B, DNA MISMATCH REPAIR PROTEIN MUTS [Thermus aquaticus] |
| 1FW6_A | 4.10e-09 | 352 | 427 | 8 | 85 | CRYSTALSTRUCTURE OF A TAQ MUTS-DNA-ADP TERNARY COMPLEX [Thermus aquaticus],1FW6_B CRYSTAL STRUCTURE OF A TAQ MUTS-DNA-ADP TERNARY COMPLEX [Thermus aquaticus] |
| 5X9W_A | 4.24e-07 | 356 | 427 | 10 | 81 | MismatchRepair Protein [Neisseria gonorrhoeae FA 1090],5X9W_B Mismatch Repair Protein [Neisseria gonorrhoeae FA 1090] |
| 5YK4_A | 4.25e-07 | 356 | 427 | 13 | 84 | MismatchRepair Protein [Neisseria gonorrhoeae FA 1090],5YK4_B Mismatch Repair Protein [Neisseria gonorrhoeae FA 1090] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 1.19e-34 | 922 | 2242 | 47 | 1567 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
| Q24X61 | 2.70e-11 | 346 | 423 | 6 | 83 | DNA mismatch repair protein MutS OS=Desulfitobacterium hafniense (strain Y51) OX=138119 GN=mutS PE=3 SV=1 |
| P70755 | 6.06e-11 | 352 | 423 | 4 | 78 | DNA mismatch repair protein MutS OS=Aquifex pyrophilus OX=2714 GN=mutS PE=3 SV=1 |
| O66652 | 1.80e-10 | 355 | 423 | 7 | 78 | DNA mismatch repair protein MutS OS=Aquifex aeolicus (strain VF5) OX=224324 GN=mutS PE=3 SV=1 |
| Q01X96 | 2.37e-10 | 356 | 427 | 7 | 78 | DNA mismatch repair protein MutS OS=Solibacter usitatus (strain Ellin6076) OX=234267 GN=mutS PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000059 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |