CAZyme Information: MGYG000000068_02332

Basic Information

• Species: Agathobaculum sp900291975
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Butyricicoccaceae; Agathobaculum; Agathobaculum sp900291975
• CAZyme ID: MGYG000000068_02332
• CAZy Family: CBM54
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1613		176186.3	4.4273

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000068	2991491	Isolate	United Kingdom	Europe

• Gene Location: Start: 62529; End: 67370 Strand: -

Full Sequence      

MSHFLSHVIHSAKRVCALSLCTALLFGMLPLTVPSAQAAWEDAYLSRLVSWNIMRGDQNG
NLEPGRAITRAEFASMLNRTFGYHKTGAQPFRDVRTGDWFYDDISIAYTAGYFKGTSNST
ASPDDTLTREEAATMLCRNLMLQPQSGEDLSFTDSRKASSWSRGYIKAAAEKGILTGDPE
GTFRPLDRITRGEVATMLVRVIGTPIQSAGTYSNSVSGNLMVSTSGVTLENMTVTGDLYI
TPGVGLGYVTLNNVTVYGQIIASGAGESNKGDASIILKNCTAPEMIVDSPTNQYVTIRTV
GNTDIDRVYIRTNTYLEGKSTGRHGFDYVEVDGEEGTQLDLAGNMHEVVTMSPKSTINVG
SGTVEKLTVDENAVDSKVTIAQGAVVEQLNLDTGTTVTGKGDIGTLYVNAPGCTVEMLPD
VIIIRPGITANIDGITMDSTMADQMSDKPRILSGYPRLSDVAPNQAEASFMTNKPGTLYW
AVRLSGDGAFDANDLIKPPSYGGKIVKSGNLSVKDANDALSQKITGLQPGASYVLSAVLV
DARDDRSTVKSVYFTTPDNSKPNFASGYPRTSTIEDTYVTFDVAATKTCTLYWAIYKKGM
PAPTANDFKDGSLSGAISSGKGKLIRSEEDNILMGNKDKYARDALAEVTEYDAYFFLTDT
VNDSAVKKISVKTADRTPPVFRTNYPRISKIDAKALTGESMINEDGKVYWAIVKHGTENY
PQSNPDLDEEAQALDKKLQIKGGMYALKSGSFNAKQDAVASFNMSGLDAETAYDIYFVAE
DTAGNLSEIATILNAKTLDSSAPELVELRFSQANDEDIPLANTDVTLVFSEDIYSRETQM
SLSEMFASGKNDFTLAGDKDQTPIKWVDIIRGMFTFNNMDNPTDQRKQELELGPDGRQNI
TVKLNEEGQTEVTFANAALKLQSGATYQFVLNNITDSSNNVLPANTKSQEFRVLDAQVDF
NKLQYTAADVDGFNPAGIEASFSMVPYANSTENVPDGTKYDLLIASDTTISFKLYRRDLS
AEKPAWEIVTDTVGTPVEFTINKTPDEKWTAASLNRAEGLEPTDYPQLNQLVQGYEYAVE
FTSINLDRDRNKWDATVNLYMYCVAGSPNELQNLTSGGIVEQSFWDSYVIQQKKLASIGN
PSDFTIDVRRVNQNAPQFMQGYPRVAPGDSLTRVDYMLDREADVYYVVAPVNRLEPDLDD
PGLIIDIGQFKDDGDAEAALPEPGKRKEQGIRTPTTQNIMSPSNYTPANGYQTGKVRYGG
TGQGSFTVEDLQPNQEYYIYFVLKGSYKDPSPVWCYKFNTSDVVPPVLTANSTGDGQATF
SIKPAAGQTSVEAEVHWLLYPQATQSGYPPLFSTQINGKTALEMMESDAFDKWSSDTSIG
GYKDSTAFKEALWEIMQGGSDASPAPDQNGAERNFSGTETVIDKDQLQNEPTKYLFIVAA
KNELGGLPVFRVVKNIQKVNRSGPLVKSMNTTSTYSNNKHWYNGTVTINFDTELYVFDDS
MSTPEAYIPTVGKNSDLFPDSVEYVKLSNLNPTRSLGVKFNNFVVGDSFTITPTDGKGNG
GYFSNKSGYMRTDGSITFTLQYKRDSDGNPIEEDGANKVEFVLSDGTTSETAP

Enzyme Prediction     

No EC number prediction in MGYG000000068_02332.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM54	197	313	4.5e-24	0.9736842105263158

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033190	inl_like_NEAT_1	1.46e-13	40	202	590	752	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033190	inl_like_NEAT_1	1.67e-09	75	201	566	690	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395	SLH	3.43e-09	152	194	1	42	S-layer homology domain.
pfam00395	SLH	1.10e-06	91	132	1	42	S-layer homology domain.
pfam00395	SLH	0.005	39	73	8	42	S-layer homology domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIA32369.1	1.86e-305	11	1503	8	1504
QQR07714.1	2.03e-304	11	1503	8	1504
BCK84769.1	9.43e-260	12	1561	16	1611
AMJ42396.1	8.64e-193	40	1513	50	1635
QAT42028.1	3.35e-188	13	1507	2	1409

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GZT_A	1.41e-08	209	268	44	108	CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7]
6BT4_A	2.20e-08	89	205	24	144	Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis]
3PYW_A	2.24e-08	89	205	3	123	Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis]
5GZT_B	8.48e-07	301	412	27	141	CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P38536	2.26e-19	40	198	1689	1851	Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38535	2.34e-17	40	198	915	1077	Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
P38537	8.26e-16	48	842	50	864	Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1
P19424	3.78e-13	73	200	23	146	Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
Q06852	1.12e-12	30	202	2089	2264	Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000453	0.998712	0.000221	0.000208	0.000186	0.000167

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000068_02332.