CAZyme Information: MGYG000000042_02171

Basic Information

• Species: Phocaeicola sp900066445
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900066445
• CAZyme ID: MGYG000000042_02171
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
843	MGYG000000042_12|CGC1	97915.87	8.5506

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000042	3613218	Isolate	United Kingdom	Europe

• Gene Location: Start: 142; End: 2673 Strand: -

Full Sequence      

MNKHYFLSKTIISLLCLLMFSTIVLAQKTSLTRVHENVRETAYPQKFHTLYINPSPLIIP
ERMKTDELIQFELSMDSAFPENATITSAPKPWLMFNPHRILKTGKWFWRVRNITSKGEKK
EWSETFEFTVTGEEPQFVTPEFDVFYRNMPKGYPRLYCFLEKDLKDARKNITSHPEYKDM
TGRANTAMKSDFDTAKNTYRNARKNNSFIVWLNTAYLLTGDTKYSDKMVTYVRNLINSKL
DPKLLKDDFYSGELIESLLYIYDSCNKILSTDELDKIEAMVFEVAKGHHMVQRQGHEETH
IFNNHYWQHCFRQMMQVGLMFADKNKTAYEMLEYCYEVWTARAPASGFNRDGEWHNGTGY
FTANTHTLYYVPSLFSYITGTDFLKHPWYQNAGRSLLYAFPVGTMSAGFGDGNERQPIPD
RQRMAFVDFLARETGNPYAAWYANHCSRQVRSDFEMRLYRMARSNKTYSQSKELPKDRPN
AVWLEDIGEVLAHSAIQNTNRNLFLSFRSSQFGSGSHTLADQNSFNLHFRGVPVYRSTGY
YLNFSDAHNLMSYRHTRAHNTILVDGIGQPFTTRAYGKITRMLNGENITYALGDASNAYC
GTSEYPMWIENFKKAGITQTPENGFGETPLKKYRRHIFMLHPNIVVIYDELEATKPVTWD
WMLHSPVKFNIDNKNNKLTTRYDSKNFTSIAQIFSNQSCEISQTDQFVCPPDPKKMKKGQ
EDKYVNQWHMTAKFQPSKANRILTIIRIQPDEQKELNVNRKGNIFSCEKWNIEAELDPSK
PASLRIVNTRNNATFSLGNGNVKICDTTYQRLEEGSSVLYDNIDGEWLVHEMSDYEPLIT
GAR

Enzyme Prediction     

No EC number prediction in MGYG000000042_02171.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	495	651	1.6e-50	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	4.50e-79	35	444	4	446	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	9.63e-12	499	681	18	182	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ49807.1	4.87e-311	22	841	14	831
QUT44273.1	3.83e-293	57	841	1	783
QRQ48971.1	1.58e-279	31	841	15	824
QUT44689.1	4.50e-279	31	841	15	824
QIU94214.1	3.56e-266	36	842	46	847

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	5.65e-111	32	837	47	864	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	3.15e-108	32	837	47	864	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	5.30e-29	73	665	57	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	8.66e-28	73	665	57	661	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000606	0.998435	0.000382	0.000170	0.000178	0.000170

TMHMM  Annotations     

start	end
5	27