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CAZyme Information: MGYG000000029_00871

You are here: Home > Sequence: MGYG000000029_00871

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides finegoldii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides finegoldii
CAZyme ID MGYG000000029_00871
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
417 MGYG000000029_4|CGC2 46772.3 4.6313
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000029 4415875 Isolate United Kingdom Europe
Gene Location Start: 70177;  End: 71430  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000029_00871.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 287 410 1.4e-18 0.9193548387096774

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 1.01e-15 291 410 7 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 3.25e-08 302 414 29 143
Substituted updates: Jan 31, 2002
smart00231 FA58C 3.35e-05 289 378 15 104
Coagulation factor 5/8 C-terminal domain, discoidin domain. Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
cd00146 PKD 4.85e-05 181 269 1 81
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
pfam18911 PKD_4 2.59e-04 222 249 47 73
PKD domain. This entry is composed of PKD domains found in bacterial surface proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63788.1 2.46e-114 2 417 3 420
QNL39441.1 5.11e-110 1 414 1 416
QGT72072.1 5.79e-110 1 414 16 431
AWW31575.1 1.75e-20 280 415 226 356
QEC76317.1 4.13e-17 280 414 235 369

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3F2Z_A 7.16e-09 274 416 4 149
Crystalstructure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B [Bacteroides fragilis NCTC 9343]
1W8N_A 7.81e-09 242 415 429 600
Contributionof the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens. [Micromonospora viridifaciens],1W8O_A Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens [Micromonospora viridifaciens]
1WCQ_A 7.81e-09 242 415 429 600
Mutagenesisof the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens],1WCQ_B Mutagenesis of the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens],1WCQ_C Mutagenesis of the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens]
2BER_A 7.81e-09 242 415 429 600
Y370GActive Site Mutant of the Sialidase from Micromonospora viridifaciens in complex with beta-Neu5Ac (sialic acid). [Micromonospora viridifaciens]
2BZD_A 7.81e-09 242 415 429 600
Galactoserecognition by the carbohydrate-binding module of a bacterial sialidase. [Micromonospora viridifaciens],2BZD_B Galactose recognition by the carbohydrate-binding module of a bacterial sialidase. [Micromonospora viridifaciens],2BZD_C Galactose recognition by the carbohydrate-binding module of a bacterial sialidase. [Micromonospora viridifaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q02834 4.44e-08 242 415 475 646
Sialidase OS=Micromonospora viridifaciens OX=1881 GN=nedA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000227 0.044370 0.955294 0.000039 0.000057 0.000038

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000029_00871.