CAZyme Information: MGYG000000024_02208

Basic Information

• Species: Paraclostridium bifermentans
• Lineage: Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Paraclostridium; Paraclostridium bifermentans
• CAZyme ID: MGYG000000024_02208
• CAZy Family: GH0
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
423	MGYG000000024_2|CGC1	46901.27	5.4767

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000024	3641600	Isolate	United Kingdom	Europe

• Gene Location: Start: 45547; End: 46818 Strand: -

Full Sequence      

MQDGFLTVSVVDSTTNFPVVGANVNVYSVGDDNKASTVIYQNLKTDISGQVVGLNLAAPD
LIYSQQPSDVRPYSQYIVEVIKDGYETIIINGTQVLATVIAQQGIQMVPRQRSKRLYSRQ
NEIVVDIGPHTLWGTYPPKIPESDLKPIPPPTGFVVLDNPVVPEFVVVHDGLPENKNAPD
YWVYFKDYVKNVASSEIYSTWPTETILANVIAIVSFTLNRVFTEWYRSKGYSFTITSTTA
YDHKYIHERNVFDTISIAVDEVFNTFIKRPPTARQPLLAQYCDGNKTQCPGQMTQWGSKN
LGDQGLSYEEILRKFYGESIVLEKAPVVSGVPVSFPGEALKVGSSGKDVRTIQNQLNAIS
KGYPAIPKVKEDGVFGQDTADSVKVFQGIFGLPQSGIVDFKTWYELSRVYVAVTKIASLN
PTI

Enzyme Prediction     

No EC number prediction in MGYG000000024_02208.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01471	PG_binding_1	1.06e-12	345	406	1	57	Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409	PGRP	8.97e-08	256	408	32	185	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409	PGRP	5.35e-07	293	406	1	102	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CEK39509.1	6.87e-279	1	423	1	423
CEJ75061.1	2.29e-277	1	423	1	423
QYE97751.1	9.34e-277	1	423	1	423
AUN15650.1	6.29e-275	1	423	1	423
AVB66705.1	3.17e-238	1	423	1	423

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000029	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000024_02208.