CAZyme Information: MGYG000000013_03167

Basic Information

• Species: Bacteroides sp902362375
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375
• CAZyme ID: MGYG000000013_03167
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
867	MGYG000000013_7|CGC8	98460.44	8.4243

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000013	6368149	Isolate	United Kingdom	Europe

• Gene Location: Start: 389248; End: 391851 Strand: -

Full Sequence      

MKLTLYTLTICLLASGLYAQQSPVNIRLKDVTLMHEMRATPSPSDKAVVADRIVSFQWPL
QEGLYVVESGLDGLDTKHKVDKSKVRYSLRYSQDPTFKTGVVQVETRWPFYNPEKDLTPG
VWYWQYGNVKDGKTKWATVQQFTVETNPDKFCPPSLKEVLAKVPHEHPRVWLDKKEWEHF
IRRSISTPERKIYISAANKAMKTPMKSINDVNTKLLANLNSEMERNAMLTRESRRIVDRE
ESNLDVIIRAYMLTKERRYADEAIKRIKEIITWGESDNVKGDFNDATFVSLGTLAYDALY
DLLDEDTRKDLLACIRKYGNKMYDHYNNYLENHIAENHVWQMTLRILTMAAFTVYGELPE
ADTWVDYCYNVWLARFPGLNKDGAWHNGDSYFTVNTRTLIEVPYFYSRLTGFDFFSDPWY
QGSVLYTIYQQPPFSKSGGNGSSHEKVLTPRGVRVGYADAVARMTGNTYAADYVRTIRAR
QPNILNEGSTSKAGGLAWFRLQCDKPLPVGAGLADLPMGHVFPQSGLASFSTRLSQTENS
AMISFRSSPYGGTSHALTNQNAFNTFWGGQSLFYSSGHGTSFIDKHSVYCYRATRAHNTI
LVNGMGQRIGTEGYGWIPRHYISENIGYVVGDASNAYGKVISPLWIERGKVAGLEYTPEN
GWDEVGLKTYRRHIVELGKTGLTFIYDELEAEQPVTWSYLLHTVTNPMNVDKSNPDWVHV
QATNKEGISDAYLFSTGVLKTDTTSQFFTPAVNWLIADEKGNFKTYANHWHFTATSDKQK
VYRFATIIDTHAKLTPTAQPRMLKDGCIEIGDWNIKVNLSSKGAPSFFVRNTKKGENVSI
DYKGKATIVKENGTEKVLVDKVPELEI

Enzyme Prediction     

No EC number prediction in MGYG000000013_03167.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	535	689	5.7e-85	0.9871794871794872

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	0.0	31	505	1	476	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	3.34e-07	514	702	1	165	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT44203.1	0.0	26	867	27	876
QRQ49816.1	0.0	24	867	25	876
EPH20506.1	0.0	26	867	27	876
QRQ49813.1	0.0	7	867	12	873
QUT44206.1	0.0	21	867	21	873

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	2.00e-282	1	867	1	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	1.49e-279	1	867	1	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	1.50e-36	86	707	52	665	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	2.56e-35	86	707	52	665	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000353	0.998885	0.000229	0.000193	0.000163	0.000150

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000013_03167.