CAZyme Information: MGYG000000013_01139

Basic Information

• Species: Bacteroides sp902362375
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375
• CAZyme ID: MGYG000000013_01139
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
954	MGYG000000013_3|CGC2	106152.79	6.4646

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000013	6368149	Isolate	United Kingdom	Europe

• Gene Location: Start: 108854; End: 111718 Strand: +

Full Sequence      

MKNKMKWMLAIGLLSCSMAMAQQQSDILSVSASANADNAALAFDKNVKTMWTLPSQALKT
EQWLMFTIQQPGDVCELDLQMQGVNKNELKEVLDIFVTYDPMNLGTPVNNRIEGNDKQMK
VKFTPKYGAHVKLNFKPGKLDKPFSLKEISVLVAEKVLTDSKGKVTDRRYMDASLPVEER
VESLLAVMTPEDKMELIREGWGIPGIPHLYVPPITKVEAVHGFSYGSGATIFPQALAMGA
TWNRKLTEEVAMVIGDETVAANTKQAWSPVLDVAQDARWGRCEETFGEDPVLVSQIGGAW
IKGYQSRGLFTTPKHFGGHGAPLGGRDSHDIGLSEREMREVHLVPFRHAIRNYDCQSLMM
AYSDYMGIPVAKSMELLQQILRQEWGFNGFIVSDCGAIGNLTARKHYTAQDKIEAANQAL
AAGIATNCGDTYNNKEVIQAAKDGRINMENLDNVCRTMLSTMFRNELFEKNPCKPLDWKK
IYPGWNSDSHKEMARQAARESIVMLENKENLLPLTKNLRTIAVLGPGADDLQPGDYTPKL
LPGQLKSVLTGIKEAVGKQTKVLYEQGCDFTNPDETNIPKAVKAASQSDVVVMVLGDCST
SEATNDVRKTCGENNDWATLILPGKQQELLEAVCATGKPVILILQAGRPYDILKASEMCK
AILVNWLPGQEGGPAMADVLFGDYNPGGRLPMTFPRHVGQLPLYYNFKTSGRRYEYVDME
YYPLYRFGFGLSYTSFEYSDLKIQEKPNGNVTVQATVKNTGSRAGDEVVQLYVTDMYASV
KTRVMELKDFDRIYLQPGESKTVSFELTPYDISLLNDHMDRVVEKGEFKICVGGMSPDYV
AKNEIKHSVGYSDKKKGVTGMLNYTHEFGADFILSISKVEENLTKNQKTVWVSVKNNGTL
MDIGKVEMFVDGKKAGDAIHYELGAGEEKLIPFKLDKDNKQPVAFTTKYKMVVL

Enzyme Prediction     

No EC number prediction in MGYG000000013_01139.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	206	426	1.5e-69	0.9675925925925926

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	1.35e-170	230	833	118	751	beta-glucosidase BglX.
PLN03080	PLN03080	2.12e-101	170	833	42	769	Probable beta-xylosidase; Provisional
COG1472	BglX	1.17e-80	195	561	44	392	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915	Glyco_hydro_3_C	3.64e-71	502	733	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933	Glyco_hydro_3	5.56e-57	209	460	64	315	Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGT74176.1	0.0	5	954	1	950
QIU96998.1	0.0	1	954	1	954
BCA51192.1	0.0	1	952	1	952
QUT72096.1	0.0	1	952	1	952
QUT39633.1	0.0	1	952	1	952

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5YOT_A	1.07e-118	169	838	6	747	Isoprimeverose-producingenzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
7EAP_A	7.99e-118	169	838	6	747	ChainA, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5XXL_A	1.79e-109	209	838	82	743	Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
6R5I_A	3.46e-109	216	833	71	719	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
5TF0_A	7.58e-109	209	836	81	740	CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KMH0	6.67e-137	177	836	33	710	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
Q56078	2.06e-119	203	833	96	751	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363	4.02e-119	206	833	99	751	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
P14002	5.29e-97	181	846	5	667	Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2
T2KMH9	7.26e-92	170	839	29	747	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.002264	0.767005	0.229366	0.000622	0.000359	0.000357

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000013_01139.