dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03348
Location and strand information: 24716 - 28036 (+)
Family: 3.A.5.1.1
Protein type: TC
Protein description: Protein translocase subunit SecA

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03349
Location and strand information: 28167 - 30323 (-)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 6.4221
Protein molecular weight: 82184.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03350
Location and strand information: 30505 - 31398 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator Btr

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03351
Location and strand information: 31406 - 34339 (-)
Family: GH2|CBM32
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.2328
Protein molecular weight: 110461.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03352
Location and strand information: 34344 - 35363 (-)
Family: null
Protein type: null
Protein description: Aldose 1-epimerase

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03353
Location and strand information: 35492 - 37111 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03354
Location and strand information: 37160 - 40225 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03355
Location and strand information: 40271 - 42298 (-)
Family: GH36|GH27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9032
Protein molecular weight: 75827.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03356
Location and strand information: 42496 - 46515 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03357
Location and strand information: 46649 - 48634 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.6232
Protein molecular weight: 74547.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03358
Location and strand information: 48654 - 51995 (-)
Family: TPR_1+TPR_2+TPR_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03359
Location and strand information: 52019 - 53404 (-)
Family: 2.A.1.1.55
Protein type: TC
Protein description: D-xylose-proton symporter

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03360
Location and strand information: 53696 - 56107 (-)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3062
Protein molecular weight: 88673.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03361
Location and strand information: 56381 - 57481 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03362
Location and strand information: 57574 - 58020 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03363
Location and strand information: 58111 - 61116 (-)
Family: GH55
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5153
Protein molecular weight: 111611.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03364
Location and strand information: 61380 - 64376 (-)
Family: GH55
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4693
Protein molecular weight: 112278.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03365
Location and strand information: 64476 - 65192 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03366
Location and strand information: 65219 - 67210 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004899_23|CGC1
Gene ID: MGYG000004899_03367
Location and strand information: 67223 - 70624 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004899_03348	Protein translocase subunit SecA	TC	24716	28036	+	3.A.5.1.1
MGYG000004899_03349	Alpha-galactosidase AgaA	CAZyme	28167	30323	-	GH36
MGYG000004899_03350	HTH-type transcriptional activator Btr	TF	30505	31398	+	HTH_AraC+HTH_AraC
MGYG000004899_03351	Beta-galactosidase	CAZyme	31406	34339	-	GH2\| CBM32
MGYG000004899_03352	Aldose 1-epimerase	null	34344	35363	-	Aldose_epim
MGYG000004899_03353	SusD-like protein	null	35492	37111	-	SusD-like_3\| SusD_RagB
MGYG000004899_03354	TonB-dependent receptor SusC	TC	37160	40225	-	1.B.14.6.1
MGYG000004899_03355	hypothetical protein	CAZyme	40271	42298	-	GH36\| GH27
MGYG000004899_03356	Sensor histidine kinase RcsC	TF	42496	46515	-	HTH_AraC
MGYG000004899_03357	Retaining alpha-galactosidase	CAZyme	46649	48634	-	GH97
MGYG000004899_03358	hypothetical protein	STP	48654	51995	-	TPR_1\| TPR_2\| TPR_2
MGYG000004899_03359	D-xylose-proton symporter	TC	52019	53404	-	2.A.1.1.55
MGYG000004899_03360	hypothetical protein	CAZyme	53696	56107	-	GH95
MGYG000004899_03361	hypothetical protein	null	56381	57481	+	DUF6340
MGYG000004899_03362	hypothetical protein	null	57574	58020	+	No domain
MGYG000004899_03363	hypothetical protein	CAZyme	58111	61116	-	GH55
MGYG000004899_03364	hypothetical protein	CAZyme	61380	64376	-	GH55
MGYG000004899_03365	hypothetical protein	null	64476	65192	-	DUF3823\| DUF3823_C
MGYG000004899_03366	hypothetical protein	null	65219	67210	-	SusD-like_3\| SusD_RagB
MGYG000004899_03367	hypothetical protein	TC	67223	70624	-	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature