dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00304
Location and strand information: 139326 - 140231 (+)
Family: GH43|GH43_31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6769
Protein molecular weight: 34053.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00305
Location and strand information: 140429 - 144454 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00306
Location and strand information: 144644 - 145747 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.8469
Protein molecular weight: 42944.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00307
Location and strand information: 145800 - 148520 (+)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 6.6151
Protein molecular weight: 103367.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00308
Location and strand information: 148530 - 150392 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00309
Location and strand information: 150431 - 151579 (+)
Family: GH130
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.1867
Protein molecular weight: 42786.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00310
Location and strand information: 151645 - 152751 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 9.1937
Protein molecular weight: 43047.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00311
Location and strand information: 152776 - 155733 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8034
Protein molecular weight: 111776.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00312
Location and strand information: 155745 - 158288 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0192
Protein molecular weight: 97916.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00313
Location and strand information: 158542 - 161295 (+)
Family: GH63
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8806
Protein molecular weight: 104649.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00314
Location and strand information: 161622 - 164744 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00315
Location and strand information: 164779 - 166602 (+)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00316
Location and strand information: 166605 - 167636 (+)
Family: GH43|GH43_3
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA
Protein isoelectric point: 5.6892
Protein molecular weight: 38166.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00317
Location and strand information: 167651 - 168628 (+)
Family: GH43|GH43_3
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA
Protein isoelectric point: 7.1343
Protein molecular weight: 36391.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00318
Location and strand information: 168698 - 170686 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00319
Location and strand information: 170902 - 171312 (-)
Family: null
Protein type: null
Protein description: Endoribonuclease YbeY

Gene clsuter ID: MGYG000004876_2|CGC5
Gene ID: MGYG000004876_00320
Location and strand information: 171332 - 172564 (-)
Family: 9.B.156.3.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004876_00304	hypothetical protein	CAZyme	139326	140231	+	GH43\| GH43_31
MGYG000004876_00305	Sensor histidine kinase RcsC	TF	140429	144454	+	HTH_AraC+HTH_AraC
MGYG000004876_00306	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	144644	145747	+	GH105
MGYG000004876_00307	Exo-beta-D-glucosaminidase	CAZyme	145800	148520	+	GH2
MGYG000004876_00308	hypothetical protein	null	148530	150392	+	FAD_oxidored
MGYG000004876_00309	hypothetical protein	CAZyme	150431	151579	+	GH130
MGYG000004876_00310	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	151645	152751	+	GH105
MGYG000004876_00311	hypothetical protein	CAZyme	152776	155733	+	GH115
MGYG000004876_00312	hypothetical protein	CAZyme	155745	158288	+	GH31
MGYG000004876_00313	hypothetical protein	CAZyme	158542	161295	+	GH63
MGYG000004876_00314	hypothetical protein	TC	161622	164744	+	1.B.14.6.1
MGYG000004876_00315	hypothetical protein	TC	164779	166602	+	8.A.46.1.6
MGYG000004876_00316	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA	CAZyme	166605	167636	+	GH43\| GH43_3
MGYG000004876_00317	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA	CAZyme	167651	168628	+	GH43\| GH43_3
MGYG000004876_00318	hypothetical protein	null	168698	170686	+	No domain
MGYG000004876_00319	Endoribonuclease YbeY	null	170902	171312	-	YbeY
MGYG000004876_00320	hypothetical protein	TC	171332	172564	-	9.B.156.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature