dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00757
Location and strand information: 2931 - 5660 (-)
Family: 1.B.42.1.8
Protein type: TC
Protein description: LPS-assembly protein LptD

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00758
Location and strand information: 5751 - 6287 (-)
Family: HD
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00759
Location and strand information: 6363 - 7238 (+)
Family: 1.A.23.4.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00760
Location and strand information: 7312 - 7770 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00761
Location and strand information: 7772 - 9028 (+)
Family: GH171
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7943
Protein molecular weight: 47297.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00762
Location and strand information: 9307 - 10887 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00763
Location and strand information: 10891 - 11925 (-)
Family: 8.A.1.1.2
Protein type: TC
Protein description: Multidrug export protein EmrA

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00764
Location and strand information: 12230 - 13570 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00765
Location and strand information: 13790 - 14146 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004823_34|CGC1
Gene ID: MGYG000004823_00766
Location and strand information: 14188 - 15156 (-)
Family: 2.A.119.1.3
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004823_00757	LPS-assembly protein LptD	TC	2931	5660	-	1.B.42.1.8
MGYG000004823_00758	hypothetical protein	STP	5751	6287	-	HD
MGYG000004823_00759	hypothetical protein	TC	6363	7238	+	1.A.23.4.1
MGYG000004823_00760	hypothetical protein	null	7312	7770	-	No domain
MGYG000004823_00761	hypothetical protein	CAZyme	7772	9028	+	GH171
MGYG000004823_00762	hypothetical protein	null	9307	10887	-	No domain
MGYG000004823_00763	Multidrug export protein EmrA	TC	10891	11925	-	8.A.1.1.2
MGYG000004823_00764	hypothetical protein	null	12230	13570	-	OEP\| OEP
MGYG000004823_00765	hypothetical protein	null	13790	14146	+	No domain
MGYG000004823_00766	hypothetical protein	TC	14188	15156	-	2.A.119.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature