dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02890
Location and strand information: 18926 - 22231 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02891
Location and strand information: 22249 - 24300 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02892
Location and strand information: 24509 - 26722 (+)
Family: GH139
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9166
Protein molecular weight: 84626.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02893
Location and strand information: 26851 - 29361 (+)
Family: GH147
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4066
Protein molecular weight: 95027.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02894
Location and strand information: 29602 - 29784 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02895
Location and strand information: 29825 - 29998 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02896
Location and strand information: 30042 - 31217 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.6239
Protein molecular weight: 44986.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02897
Location and strand information: 31230 - 34076 (+)
Family: GH105|GH43_19|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8089
Protein molecular weight: 109347.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02898
Location and strand information: 34128 - 36074 (+)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.2104
Protein molecular weight: 73166.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02899
Location and strand information: 36162 - 38309 (+)
Family: GH59
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6639
Protein molecular weight: 79879.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02900
Location and strand information: 38306 - 39889 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0983
Protein molecular weight: 60689.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02901
Location and strand information: 39898 - 42762 (+)
Family: GH43_34|GH43_19|GH43_29|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8308
Protein molecular weight: 108878.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004797_44|CGC2
Gene ID: MGYG000004797_02902
Location and strand information: 42818 - 44146 (+)
Family: GH43_24|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9658
Protein molecular weight: 50172.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004797_02892	GH139_e0\|3.2.1.-	pectin
MGYG000004797_02893
MGYG000004797_02896	GH105_e2\|3.2.1.-	pectin
MGYG000004797_02897	GH43_e71
MGYG000004797_02898	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000004797_02899
MGYG000004797_02900	GH31_e57
MGYG000004797_02901	GH43_e38\|3.2.1.55	xylan
MGYG000004797_02902	GH43_e7

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004797_02890	TonB-dependent receptor SusC	TC	18926	22231	+	1.B.14.6.1
MGYG000004797_02891	hypothetical protein	null	22249	24300	+	SusD-like_3\| SusD_RagB
MGYG000004797_02892	hypothetical protein	CAZyme	24509	26722	+	GH139
MGYG000004797_02893	hypothetical protein	CAZyme	26851	29361	+	GH147
MGYG000004797_02894	hypothetical protein	null	29602	29784	-	No domain
MGYG000004797_02895	hypothetical protein	null	29825	29998	+	No domain
MGYG000004797_02896	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	30042	31217	+	GH105
MGYG000004797_02897	hypothetical protein	CAZyme	31230	34076	+	GH105\| GH43_19\| GH43
MGYG000004797_02898	Retaining alpha-galactosidase	CAZyme	34128	36074	+	GH97
MGYG000004797_02899	hypothetical protein	CAZyme	36162	38309	+	GH59
MGYG000004797_02900	hypothetical protein	CAZyme	38306	39889	+	GH31
MGYG000004797_02901	hypothetical protein	CAZyme	39898	42762	+	GH43_34\| GH43_19\| GH43_29\| GH43
MGYG000004797_02902	hypothetical protein	CAZyme	42818	44146	+	GH43_24\| GH43
Protein ID	Protein Name	Type	Start	End	Strand	Signature