dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00925
Location and strand information: 27875 - 30250 (+)
Family: 1.B.14.6.7
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00926
Location and strand information: 30353 - 31906 (-)
Family: GH30_4|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.7061
Protein molecular weight: 58587.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00927
Location and strand information: 31947 - 33695 (-)
Family: GH30_4|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6484
Protein molecular weight: 63827.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00928
Location and strand information: 33854 - 35446 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00929
Location and strand information: 35465 - 38488 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00930
Location and strand information: 38525 - 39988 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00931
Location and strand information: 40250 - 44383 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00932
Location and strand information: 44424 - 47222 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 8.0402
Protein molecular weight: 105290.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00933
Location and strand information: 47219 - 49264 (-)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.5888
Protein molecular weight: 77231.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00934
Location and strand information: 49309 - 51927 (-)
Family: CBM32|GH2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3951
Protein molecular weight: 97717.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00935
Location and strand information: 51947 - 55201 (-)
Family: TPR_2+TPR_2+TPR_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00936
Location and strand information: 55245 - 56528 (-)
Family: 2.A.1.1.55
Protein type: TC
Protein description: D-xylose-proton symporter

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00937
Location and strand information: 56694 - 57620 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000004588_13|CGC2
Gene ID: MGYG000004588_00938
Location and strand information: 58357 - 59970 (-)
Family: CBM35|GH27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0168
Protein molecular weight: 60194.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004588_00926	GH30_e50\|3.2.1.38	beta-fucosides
MGYG000004588_00927	GH30_e7\|3.2.1.38	beta-fucosides
MGYG000004588_00932	GH2_e63\|3.2.1.23	beta-galactan
MGYG000004588_00933	GH35_e6\|3.2.1.23	pectin
MGYG000004588_00934	GH2_e110\|CBM32_e75
MGYG000004588_00938	GH27_e17\|CBM35_e3\|3.2.1.22	alpha-galactan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-fucosides

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004588_00925	hypothetical protein	TC	27875	30250	+	1.B.14.6.7
MGYG000004588_00926	hypothetical protein	CAZyme	30353	31906	-	GH30_4\| GH30
MGYG000004588_00927	hypothetical protein	CAZyme	31947	33695	-	GH30_4\| GH30
MGYG000004588_00928	SusD-like protein	null	33854	35446	-	SusD-like_3\| SusD_RagB
MGYG000004588_00929	TonB-dependent receptor SusC	TC	35465	38488	-	1.B.14.6.1
MGYG000004588_00930	hypothetical protein	null	38525	39988	-	No domain
MGYG000004588_00931	Sensor histidine kinase RcsC	TF	40250	44383	+	HTH_AraC+HTH_AraC
MGYG000004588_00932	Beta-galactosidase	CAZyme	44424	47222	-	GH2
MGYG000004588_00933	hypothetical protein	CAZyme	47219	49264	-	GH35
MGYG000004588_00934	hypothetical protein	CAZyme	49309	51927	-	CBM32\| GH2
MGYG000004588_00935	hypothetical protein	STP	51947	55201	-	TPR_2\| TPR_2\| TPR_2
MGYG000004588_00936	D-xylose-proton symporter	TC	55245	56528	-	2.A.1.1.55
MGYG000004588_00937	Arabinose operon regulatory protein	TF	56694	57620	+	HTH_AraC+HTH_AraC
MGYG000004588_00938	hypothetical protein	CAZyme	58357	59970	-	CBM35\| GH27
Protein ID	Protein Name	Type	Start	End	Strand	Signature