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CAZyme Gene Cluster: MGYG000004510_3|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000004510_00260 | hypothetical protein |
TC | 50881 | 54084 | - | 1.B.14.6.1 |
| MGYG000004510_00261 | Sensor histidine kinase RcsC |
TF | 54395 | 58684 | - | HTH_AraC+HTH_AraC |
| MGYG000004510_00262 | hypothetical protein |
CAZyme | 58863 | 63416 | + | PL11_1| PL11 |
| MGYG000004510_00263 | Rhamnogalacturonan endolyase YesW |
CAZyme | 63413 | 65500 | + | PL11_1| CBM2| CBM35| PL11 |
| MGYG000004510_00264 | hypothetical protein |
CAZyme | 65604 | 67223 | + | CE12 |
| MGYG000004510_00265 | hypothetical protein |
CAZyme | 67402 | 70935 | + | GH105| GH106 |
| MGYG000004510_00266 | hypothetical protein |
CAZyme | 71022 | 72329 | + | GH28 |
| MGYG000004510_00267 | Beta-galactosidase BoGH2A |
CAZyme | 72478 | 74895 | + | GH2 |
| MGYG000004510_00268 | hypothetical protein |
CAZyme | 74937 | 76118 | + | CE12 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is pectin
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000004510_00262 | ||
| MGYG000004510_00263 | PL11_e0|CBM35_e56|CBM2_e72|4.2.2.23 | pectin |
| MGYG000004510_00264 | CE12_e40 | |
| MGYG000004510_00265 | GH106_e0|3.2.1.174 | pectin |
| MGYG000004510_00266 | GH28_e95|3.2.1.- | pectin |
| MGYG000004510_00267 | GH2_e122 | |
| MGYG000004510_00268 | CE12_e46 |
Substrate predicted by dbCAN-PUL is pectin download this fig
