dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004510_19|CGC2
Gene ID: MGYG000004510_01434
Location and strand information: 32378 - 35614 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004510_19|CGC2
Gene ID: MGYG000004510_01435
Location and strand information: 35638 - 37272 (+)
Family: 8.A.46.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004510_19|CGC2
Gene ID: MGYG000004510_01436
Location and strand information: 37558 - 40017 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6776
Protein molecular weight: 94081.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004510_19|CGC2
Gene ID: MGYG000004510_01437
Location and strand information: 40304 - 41428 (-)
Family: GH43|GH43_24|GH16
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.4508
Protein molecular weight: 42008.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004510_19|CGC2
Gene ID: MGYG000004510_01438
Location and strand information: 41665 - 43659 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004510_19|CGC2
Gene ID: MGYG000004510_01439
Location and strand information: 43671 - 46976 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004510_19|CGC2
Gene ID: MGYG000004510_01440
Location and strand information: 47168 - 51247 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004510_19|CGC2
Gene ID: MGYG000004510_01441
Location and strand information: 51600 - 51785 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004510_19|CGC2
Gene ID: MGYG000004510_01442
Location and strand information: 52755 - 53846 (+)
Family: 3.D.2.3.1
Protein type: TC
Protein description: Alanine dehydrogenase

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004510_01434	TonB-dependent receptor SusC	TC	32378	35614	+	1.B.14.6.1
MGYG000004510_01435	hypothetical protein	TC	35638	37272	+	8.A.46.1.1
MGYG000004510_01436	hypothetical protein	CAZyme	37558	40017	+	GH31
MGYG000004510_01437	hypothetical protein	CAZyme	40304	41428	-	GH43\| GH43_24\| GH16
MGYG000004510_01438	hypothetical protein	null	41665	43659	-	SusD-like_3\| SusD_RagB
MGYG000004510_01439	TonB-dependent receptor SusC	TC	43671	46976	-	1.B.14.6.1
MGYG000004510_01440	Sensor histidine kinase RcsC	TF	47168	51247	+	HTH_AraC
MGYG000004510_01441	hypothetical protein	null	51600	51785	+	No domain
MGYG000004510_01442	Alanine dehydrogenase	TC	52755	53846	+	3.D.2.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature