dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004479_21|CGC4
Gene ID: MGYG000004479_01911
Location and strand information: 53958 - 55847 (+)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.9669
Protein molecular weight: 70789.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004479_21|CGC4
Gene ID: MGYG000004479_01912
Location and strand information: 56094 - 59171 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004479_21|CGC4
Gene ID: MGYG000004479_01913
Location and strand information: 59192 - 60880 (+)
Family: 8.A.46.1.5
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004479_21|CGC4
Gene ID: MGYG000004479_01914
Location and strand information: 60896 - 61750 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004479_21|CGC4
Gene ID: MGYG000004479_01915
Location and strand information: 61955 - 63598 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4555
Protein molecular weight: 62593.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004479_21|CGC4
Gene ID: MGYG000004479_01916
Location and strand information: 63633 - 63983 (+)
Family: null
Protein type: null
Protein description: L-fucose mutarotase

Gene clsuter ID: MGYG000004479_21|CGC4
Gene ID: MGYG000004479_01917
Location and strand information: 63995 - 64927 (+)
Family: 8.A.5.1.6
Protein type: TC
Protein description: D-threo-aldose 1-dehydrogenase

Gene clsuter ID: MGYG000004479_21|CGC4
Gene ID: MGYG000004479_01918
Location and strand information: 64942 - 65862 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004479_21|CGC4
Gene ID: MGYG000004479_01919
Location and strand information: 65881 - 67131 (+)
Family: 2.A.1.7.1
Protein type: TC
Protein description: L-fucose-proton symporter

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is agarose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004479_01911	Retaining alpha-galactosidase	CAZyme	53958	55847	+	GH97
MGYG000004479_01912	TonB-dependent receptor SusC	TC	56094	59171	+	1.B.14.6.1
MGYG000004479_01913	hypothetical protein	TC	59192	60880	+	8.A.46.1.5
MGYG000004479_01914	HTH-type transcriptional activator RhaS	TF	60896	61750	-	HTH_AraC+HTH_AraC
MGYG000004479_01915	hypothetical protein	CAZyme	61955	63598	+	GH29
MGYG000004479_01916	L-fucose mutarotase	null	63633	63983	+	rhaM
MGYG000004479_01917	D-threo-aldose 1-dehydrogenase	TC	63995	64927	+	8.A.5.1.6
MGYG000004479_01918	hypothetical protein	null	64942	65862	+	Amidohydro_2
MGYG000004479_01919	L-fucose-proton symporter	TC	65881	67131	+	2.A.1.7.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature