dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004248_5|CGC1
Gene ID: MGYG000004248_00741
Location and strand information: 49572 - 52496 (-)
Family: GH106|GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8136
Protein molecular weight: 110500.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004248_5|CGC1
Gene ID: MGYG000004248_00742
Location and strand information: 52483 - 54732 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004248_5|CGC1
Gene ID: MGYG000004248_00743
Location and strand information: 55005 - 55967 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000004248_5|CGC1
Gene ID: MGYG000004248_00744
Location and strand information: 55967 - 56848 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000004248_5|CGC1
Gene ID: MGYG000004248_00745
Location and strand information: 56900 - 58471 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004248_5|CGC1
Gene ID: MGYG000004248_00746
Location and strand information: 58592 - 64036 (+)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2742
Protein molecular weight: 198324.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004248_5|CGC1
Gene ID: MGYG000004248_00747
Location and strand information: 64149 - 65780 (+)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1012
Protein molecular weight: 62214.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004248_5|CGC1
Gene ID: MGYG000004248_00748
Location and strand information: 65786 - 67996 (+)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9779
Protein molecular weight: 82377.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004248_00741	hypothetical protein	CAZyme	49572	52496	-	GH106\| GH0
MGYG000004248_00742	HTH-type transcriptional activator RhaR	TF	52483	54732	-	HTH_AraC+HTH_AraC
MGYG000004248_00743	putative multiple-sugar transport system permease YteP	TC	55005	55967	+	3.A.1.1.10
MGYG000004248_00744	L-arabinose transport system permease protein AraQ	TC	55967	56848	+	3.A.1.1.10
MGYG000004248_00745	hypothetical protein	STP	56900	58471	+	SBP_bac_1
MGYG000004248_00746	hypothetical protein	CAZyme	58592	64036	+	GH141
MGYG000004248_00747	hypothetical protein	CAZyme	64149	65780	+	GH20
MGYG000004248_00748	hypothetical protein	CAZyme	65786	67996	+	CBM67\| GH78
Protein ID	Protein Name	Type	Start	End	Strand	Signature