dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00668
Location and strand information: 4217 - 5725 (+)
Family: 3.A.1.2.3
Protein type: TC
Protein description: Galactose/methyl galactoside import ATP-binding protein MglA

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00669
Location and strand information: 5744 - 7399 (+)
Family: 3.A.1.2.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00670
Location and strand information: 7588 - 9198 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00671
Location and strand information: 9188 - 11053 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00672
Location and strand information: 11094 - 12014 (+)
Family: Peripla_BP_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00673
Location and strand information: 12056 - 13096 (+)
Family: 3.A.1.2.3
Protein type: TC
Protein description: D-galactose-binding periplasmic protein

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00674
Location and strand information: 13169 - 13945 (-)
Family: HTH_3
Protein type: TF
Protein description: RNA polymerase sigma-G factor

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00675
Location and strand information: 14173 - 16137 (-)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 4.8003
Protein molecular weight: 74433.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00676
Location and strand information: 16278 - 17078 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00677
Location and strand information: 17233 - 17466 (+)
Family: FeoA
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00678
Location and strand information: 17459 - 19513 (+)
Family: 9.A.8.1.6
Protein type: TC
Protein description: Fe(2+) transporter FeoB

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00679
Location and strand information: 19518 - 20024 (+)
Family: HTH_11
Protein type: TF
Protein description: putative transcription repressor NiaR

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00680
Location and strand information: 20483 - 21058 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit a

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00681
Location and strand information: 21148 - 21369 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit c, sodium ion specific

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00682
Location and strand information: 21419 - 21919 (+)
Family: null
Protein type: null
Protein description: ATP synthase subunit b, sodium ion specific

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00683
Location and strand information: 21900 - 22403 (+)
Family: null
Protein type: null
Protein description: ATP synthase subunit delta

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00684
Location and strand information: 22409 - 23920 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit alpha

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00685
Location and strand information: 23924 - 24814 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase gamma chain, sodium ion specific

Gene clsuter ID: MGYG000004233_11|CGC1
Gene ID: MGYG000004233_00686
Location and strand information: 24866 - 26263 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit beta

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004233_00668	Galactose/methyl galactoside import ATP-binding protein MglA	TC	4217	5725	+	3.A.1.2.3
MGYG000004233_00669	hypothetical protein	TC	5744	7399	+	3.A.1.2.3
MGYG000004233_00670	HTH-type transcriptional activator RhaR	TF	7588	9198	+	HTH_AraC+HTH_AraC
MGYG000004233_00671	hypothetical protein	TC	9188	11053	+	9.B.33.1.1
MGYG000004233_00672	hypothetical protein	STP	11094	12014	+	Peripla_BP_1
MGYG000004233_00673	D-galactose-binding periplasmic protein	TC	12056	13096	+	3.A.1.2.3
MGYG000004233_00674	RNA polymerase sigma-G factor	TF	13169	13945	-	HTH_3
MGYG000004233_00675	Non-reducing end beta-L-arabinofuranosidase	CAZyme	14173	16137	-	GH127
MGYG000004233_00676	HTH-type transcriptional activator RhaR	TF	16278	17078	+	HTH_AraC+HTH_AraC
MGYG000004233_00677	hypothetical protein	STP	17233	17466	+	FeoA
MGYG000004233_00678	Fe(2+) transporter FeoB	TC	17459	19513	+	9.A.8.1.6
MGYG000004233_00679	putative transcription repressor NiaR	TF	19518	20024	+	HTH_11
MGYG000004233_00680	ATP synthase subunit a	TC	20483	21058	+	3.A.2.1.5
MGYG000004233_00681	ATP synthase subunit c, sodium ion specific	TC	21148	21369	+	3.A.2.1.5
MGYG000004233_00682	ATP synthase subunit b, sodium ion specific	null	21419	21919	+	ATP-synt_B
MGYG000004233_00683	ATP synthase subunit delta	null	21900	22403	+	OSCP
MGYG000004233_00684	ATP synthase subunit alpha	TC	22409	23920	+	3.A.2.1.5
MGYG000004233_00685	ATP synthase gamma chain, sodium ion specific	TC	23924	24814	+	3.A.2.1.5
MGYG000004233_00686	ATP synthase subunit beta	TC	24866	26263	+	3.A.2.1.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature