dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03331
Location and strand information: 6946 - 8388 (-)
Family: GT5
Protein type: CAZyme
Protein description: Glycogen synthase
Protein isoelectric point: 6.1354
Protein molecular weight: 54190.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03332
Location and strand information: 8411 - 9532 (-)
Family: null
Protein type: null
Protein description: Glycogen biosynthesis protein GlgD

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03333
Location and strand information: 9565 - 10737 (-)
Family: null
Protein type: null
Protein description: Glucose-1-phosphate adenylyltransferase

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03334
Location and strand information: 10850 - 12850 (-)
Family: GH13_9|CBM48|GH13
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 6.1811
Protein molecular weight: 77037.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03335
Location and strand information: 13098 - 14099 (+)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03336
Location and strand information: 14360 - 15550 (+)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Leu/Ile/Val-binding protein

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03337
Location and strand information: 15834 - 16721 (+)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport system permease protein LivH

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03338
Location and strand information: 16760 - 17641 (+)
Family: 3.A.1.4.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03339
Location and strand information: 17638 - 18402 (+)
Family: 3.A.1.4.8
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000004168_39|CGC1
Gene ID: MGYG000004168_03340
Location and strand information: 18406 - 19116 (+)
Family: 3.A.1.4.8
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport ATP-binding protein LivF

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is glycogen download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004168_03331	Glycogen synthase	CAZyme	6946	8388	-	GT5
MGYG000004168_03332	Glycogen biosynthesis protein GlgD	null	8411	9532	-	NTP_transferase
MGYG000004168_03333	Glucose-1-phosphate adenylyltransferase	null	9565	10737	-	NTP_transferase
MGYG000004168_03334	1,4-alpha-glucan branching enzyme GlgB	CAZyme	10850	12850	-	GH13_9\| CBM48\| GH13
MGYG000004168_03335	Catabolite control protein A	TF	13098	14099	+	LacI
MGYG000004168_03336	Leu/Ile/Val-binding protein	TC	14360	15550	+	3.A.1.4.10
MGYG000004168_03337	High-affinity branched-chain amino acid transport system permease protein LivH	TC	15834	16721	+	3.A.1.4.10
MGYG000004168_03338	hypothetical protein	TC	16760	17641	+	3.A.1.4.10
MGYG000004168_03339	Lipopolysaccharide export system ATP-binding protein LptB	TC	17638	18402	+	3.A.1.4.8
MGYG000004168_03340	High-affinity branched-chain amino acid transport ATP-binding protein LivF	TC	18406	19116	+	3.A.1.4.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature