dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003882_11|CGC1
Gene ID: MGYG000003882_00225
Location and strand information: 7378 - 8865 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import ATP-binding protein LsrA

Gene clsuter ID: MGYG000003882_11|CGC1
Gene ID: MGYG000003882_00226
Location and strand information: 8862 - 9896 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrC

Gene clsuter ID: MGYG000003882_11|CGC1
Gene ID: MGYG000003882_00227
Location and strand information: 9897 - 10895 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000003882_11|CGC1
Gene ID: MGYG000003882_00228
Location and strand information: 10898 - 11899 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2-binding protein LsrB

Gene clsuter ID: MGYG000003882_11|CGC1
Gene ID: MGYG000003882_00229
Location and strand information: 11911 - 12798 (+)
Family: null
Protein type: null
Protein description: 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase

Gene clsuter ID: MGYG000003882_11|CGC1
Gene ID: MGYG000003882_00230
Location and strand information: 12795 - 13091 (+)
Family: null
Protein type: null
Protein description: (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase

Gene clsuter ID: MGYG000003882_11|CGC1
Gene ID: MGYG000003882_00231
Location and strand information: 13162 - 15513 (-)
Family: GH63
Protein type: CAZyme
Protein description: Glucosidase YgjK
Protein isoelectric point: 6.3513
Protein molecular weight: 87580.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003882_11|CGC1
Gene ID: MGYG000003882_00232
Location and strand information: 15531 - 16589 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003882_11|CGC1
Gene ID: MGYG000003882_00233
Location and strand information: 16604 - 18037 (-)
Family: 2.A.3.7.4
Protein type: TC
Protein description: Inner membrane transporter YgjI

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003882_00225	Autoinducer 2 import ATP-binding protein LsrA	TC	7378	8865	+	3.A.1.2.8
MGYG000003882_00226	Autoinducer 2 import system permease protein LsrC	TC	8862	9896	+	3.A.1.2.8
MGYG000003882_00227	Autoinducer 2 import system permease protein LsrD	TC	9897	10895	+	3.A.1.2.8
MGYG000003882_00228	Autoinducer 2-binding protein LsrB	TC	10898	11899	+	3.A.1.2.8
MGYG000003882_00229	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	null	11911	12798	+	DeoC
MGYG000003882_00230	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	null	12795	13091	+	ABM
MGYG000003882_00231	Glucosidase YgjK	CAZyme	13162	15513	-	GH63
MGYG000003882_00232	hypothetical protein	null	15531	16589	-	No domain
MGYG000003882_00233	Inner membrane transporter YgjI	TC	16604	18037	-	2.A.3.7.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature