dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01772
Location and strand information: 6483 - 7328 (+)
Family: 3.A.1.149.1
Protein type: TC
Protein description: ABC transporter ATP-binding protein YtrB

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01773
Location and strand information: 7349 - 8017 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01774
Location and strand information: 8007 - 8405 (+)
Family: GntR
Protein type: TF
Protein description: HTH-type transcriptional repressor YtrA

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01775
Location and strand information: 8411 - 9127 (+)
Family: 3.A.1.124.6
Protein type: TC
Protein description: ABC transporter ATP-binding protein YtrB

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01776
Location and strand information: 9130 - 9651 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01777
Location and strand information: 9695 - 11623 (+)
Family: GH33
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.963
Protein molecular weight: 71516.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01778
Location and strand information: 11696 - 12550 (+)
Family: null
Protein type: null
Protein description: Ribosomal RNA small subunit methyltransferase I

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01779
Location and strand information: 12563 - 13093 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01780
Location and strand information: 13199 - 13993 (+)
Family: 3.A.1.3.3
Protein type: TC
Protein description: Membrane-bound lytic murein transglycosylase F

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01781
Location and strand information: 13999 - 14700 (+)
Family: 3.A.1.3.15
Protein type: TC
Protein description: Arginine transport system permease protein ArtQ

Gene clsuter ID: MGYG000003613_126|CGC1
Gene ID: MGYG000003613_01782
Location and strand information: 14690 - 15430 (+)
Family: 3.A.1.3.15
Protein type: TC
Protein description: Arginine transport ATP-binding protein ArtM

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003613_01772	ABC transporter ATP-binding protein YtrB	TC	6483	7328	+	3.A.1.149.1
MGYG000003613_01773	hypothetical protein	null	7349	8017	+	No domain
MGYG000003613_01774	HTH-type transcriptional repressor YtrA	TF	8007	8405	+	GntR
MGYG000003613_01775	ABC transporter ATP-binding protein YtrB	TC	8411	9127	+	3.A.1.124.6
MGYG000003613_01776	hypothetical protein	null	9130	9651	+	No domain
MGYG000003613_01777	hypothetical protein	CAZyme	9695	11623	+	GH33
MGYG000003613_01778	Ribosomal RNA small subunit methyltransferase I	null	11696	12550	+	TP_methylase
MGYG000003613_01779	hypothetical protein	null	12563	13093	+	No domain
MGYG000003613_01780	Membrane-bound lytic murein transglycosylase F	TC	13199	13993	+	3.A.1.3.3
MGYG000003613_01781	Arginine transport system permease protein ArtQ	TC	13999	14700	+	3.A.1.3.15
MGYG000003613_01782	Arginine transport ATP-binding protein ArtM	TC	14690	15430	+	3.A.1.3.15
Protein ID	Protein Name	Type	Start	End	Strand	Signature