logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000003574_476|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000003574_02558
Alpha-amylase
CAZyme 60 1691 - GH13| GH13_36
MGYG000003574_02559
Inner membrane ABC transporter permease protein YcjP
TC 1695 2576 - 3.A.1.1.27
MGYG000003574_02560
hypothetical protein
TC 2576 3973 - 3.A.1.1.27
MGYG000003574_02561
hypothetical protein
STP 4084 5304 - SBP_bac_1
MGYG000003574_02562
HTH-type transcriptional repressor CytR
TF 5673 6668 + LacI
MGYG000003574_02563
Oligo-1,6-glucosidase
CAZyme 7177 8808 - GH13_31| GH13
MGYG000003574_02564
hypothetical protein
TC 9166 9927 - 3.A.1.9.1
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is starch

Protein ID eCAMI subfam CAZyme substrate
MGYG000003574_02558 GH13_e131|3.2.1.1 starch
MGYG000003574_02563 GH13_e0|5.4.99.11|3.2.1.70|3.2.1.20|3.2.1.10|3.2.1.-|2.4.1.- sucrose|starch

Substrate predicted by dbCAN-PUL is starch download this fig


Genomic location