dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02165
Location and strand information: 8824 - 9792 (+)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Oligopeptide transport system permease protein OppB

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02166
Location and strand information: 9782 - 11254 (+)
Family: 3.A.1.5.12
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02167
Location and strand information: 11265 - 12932 (+)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02168
Location and strand information: 12919 - 14142 (+)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02169
Location and strand information: 14139 - 14552 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02170
Location and strand information: 14727 - 15902 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02171
Location and strand information: 16222 - 17775 (-)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 4.7872
Protein molecular weight: 57507.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02172
Location and strand information: 17772 - 18236 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02173
Location and strand information: 18247 - 19599 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02174
Location and strand information: 19612 - 20721 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.5663
Protein molecular weight: 41765.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02175
Location and strand information: 20715 - 22334 (-)
Family: CE12|CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9055
Protein molecular weight: 60135.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02176
Location and strand information: 22348 - 22992 (-)
Family: null
Protein type: null
Protein description: Rhamnogalacturonan acetylesterase RhgT

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02177
Location and strand information: 23009 - 25252 (-)
Family: CBM51|GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2439
Protein molecular weight: 83540.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02178
Location and strand information: 25256 - 26512 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1786
Protein molecular weight: 45786.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02179
Location and strand information: 26525 - 28054 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02180
Location and strand information: 28225 - 29859 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003512_94|CGC1
Gene ID: MGYG000003512_02181
Location and strand information: 30114 - 30776 (-)
Family: 3.A.1.1.45
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003512_02165	Oligopeptide transport system permease protein OppB	TC	8824	9792	+	3.A.1.5.19
MGYG000003512_02166	hypothetical protein	TC	9782	11254	+	3.A.1.5.12
MGYG000003512_02167	Vitamin B12 import ATP-binding protein BtuD	TC	11265	12932	+	3.A.1.5.25
MGYG000003512_02168	Vitamin B12 import ATP-binding protein BtuD	TC	12919	14142	+	3.A.1.5.19
MGYG000003512_02169	hypothetical protein	null	14139	14552	+	DUF3899
MGYG000003512_02170	hypothetical protein	null	14727	15902	-	No domain
MGYG000003512_02171	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	16222	17775	-	GH43\| GH43_10
MGYG000003512_02172	hypothetical protein	null	17772	18236	-	No domain
MGYG000003512_02173	hypothetical protein	null	18247	19599	-	Beta-lactamase
MGYG000003512_02174	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	19612	20721	-	GH105
MGYG000003512_02175	hypothetical protein	CAZyme	20715	22334	-	CE12\| CE8
MGYG000003512_02176	Rhamnogalacturonan acetylesterase RhgT	null	22348	22992	-	Lipase_GDSL_2
MGYG000003512_02177	hypothetical protein	CAZyme	23009	25252	-	CBM51\| GH95
MGYG000003512_02178	hypothetical protein	CAZyme	25256	26512	-	GH28
MGYG000003512_02179	Lipoprotein LipO	TC	26525	28054	-	3.A.1.1.10
MGYG000003512_02180	hypothetical protein	STP	28225	29859	-	SBP_bac_1
MGYG000003512_02181	L-arabinose transport system permease protein AraQ	TC	30114	30776	-	3.A.1.1.45
Protein ID	Protein Name	Type	Start	End	Strand	Signature