dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01814
Location and strand information: 26218 - 27576 (-)
Family: 3.A.1.1.45
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01815
Location and strand information: 27869 - 28885 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator DegA

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01816
Location and strand information: 29043 - 30410 (-)
Family: 3.A.1.1.45
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01817
Location and strand information: 30826 - 31851 (+)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01818
Location and strand information: 31897 - 33627 (-)
Family: GH13|GH13_44
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 4.9292
Protein molecular weight: 63518.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01819
Location and strand information: 33893 - 35152 (+)
Family: null
Protein type: null
Protein description: Cyclodextrin-binding protein

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01820
Location and strand information: 35180 - 36580 (+)
Family: 3.A.1.1.27
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01821
Location and strand information: 36577 - 37497 (+)
Family: 3.A.1.1.27
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01822
Location and strand information: 37596 - 39629 (+)
Family: CBM48|CBM25|CBM41|GH13|GH13_14
Protein type: CAZyme
Protein description: Pullulanase
Protein isoelectric point: 5.606
Protein molecular weight: 73597.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01823
Location and strand information: 39698 - 40441 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01824
Location and strand information: 40706 - 42943 (+)
Family: GH77
Protein type: CAZyme
Protein description: 4-alpha-glucanotransferase
Protein isoelectric point: 4.7303
Protein molecular weight: 81287.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01825
Location and strand information: 43100 - 44113 (+)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01826
Location and strand information: 44212 - 46704 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6427
Protein molecular weight: 92971.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01827
Location and strand information: 46881 - 48194 (-)
Family: 3.A.1.1.45
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01828
Location and strand information: 48380 - 49777 (-)
Family: GH32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4502
Protein molecular weight: 53739.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01829
Location and strand information: 50061 - 51143 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator DegA

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01830
Location and strand information: 51150 - 51863 (-)
Family: 9.B.28.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01831
Location and strand information: 52209 - 53573 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_23|CGC3
Gene ID: MGYG000003383_01832
Location and strand information: 53815 - 55569 (+)
Family: GH13_30|GH13
Protein type: CAZyme
Protein description: Oligo-1,6-glucosidase
Protein isoelectric point: 4.3098
Protein molecular weight: 65091.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003383_01818	GH13_e36
MGYG000003383_01822	GH13_e38\|CBM48_e41\|CBM41_e2\|CBM25_e2\|3.2.1.68\|3.2.1.41\|3.2.1.1\|3.2.1.-	starch
MGYG000003383_01824	GH77_e1\|2.4.1.25	starch
MGYG000003383_01826	GH31_e36
MGYG000003383_01828	GH32_e39
MGYG000003383_01832	GH13_e149\|3.2.1.20	starch

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is starch

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003383_01814	hypothetical protein	TC	26218	27576	-	3.A.1.1.45
MGYG000003383_01815	HTH-type transcriptional regulator DegA	TF	27869	28885	+	LacI
MGYG000003383_01816	hypothetical protein	TC	29043	30410	-	3.A.1.1.45
MGYG000003383_01817	Catabolite control protein A	TF	30826	31851	+	LacI
MGYG000003383_01818	1,4-alpha-glucan branching enzyme GlgB	CAZyme	31897	33627	-	GH13\| GH13_44
MGYG000003383_01819	Cyclodextrin-binding protein	null	33893	35152	+	No domain
MGYG000003383_01820	hypothetical protein	TC	35180	36580	+	3.A.1.1.27
MGYG000003383_01821	hypothetical protein	TC	36577	37497	+	3.A.1.1.27
MGYG000003383_01822	Pullulanase	CAZyme	37596	39629	+	CBM48\| CBM25\| CBM41\| GH13\| GH13_14
MGYG000003383_01823	hypothetical protein	null	39698	40441	+	TraX
MGYG000003383_01824	4-alpha-glucanotransferase	CAZyme	40706	42943	+	GH77
MGYG000003383_01825	Catabolite control protein A	TF	43100	44113	+	LacI
MGYG000003383_01826	hypothetical protein	CAZyme	44212	46704	+	GH31
MGYG000003383_01827	hypothetical protein	TC	46881	48194	-	3.A.1.1.45
MGYG000003383_01828	hypothetical protein	CAZyme	48380	49777	-	GH32
MGYG000003383_01829	HTH-type transcriptional regulator DegA	TF	50061	51143	-	LacI
MGYG000003383_01830	hypothetical protein	TC	51150	51863	-	9.B.28.1.3
MGYG000003383_01831	hypothetical protein	null	52209	53573	+	SBP_bac_8
MGYG000003383_01832	Oligo-1,6-glucosidase	CAZyme	53815	55569	+	GH13_30\| GH13
Protein ID	Protein Name	Type	Start	End	Strand	Signature