dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00701
Location and strand information: 98922 - 99731 (+)
Family: 2.A.64.3.2
Protein type: TC
Protein description: Sec-independent protein translocase protein TatC

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00702
Location and strand information: 99715 - 100923 (+)
Family: null
Protein type: null
Protein description: Nicotinate phosphoribosyltransferase 2

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00703
Location and strand information: 101007 - 104549 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00704
Location and strand information: 104888 - 106264 (+)
Family: 2.A.1.14.41
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00705
Location and strand information: 106457 - 107674 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 8.624
Protein molecular weight: 46730.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00706
Location and strand information: 107677 - 108642 (+)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 7.7111
Protein molecular weight: 36356.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00707
Location and strand information: 108698 - 109045 (-)
Family: AraC_binding
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00708
Location and strand information: 109180 - 110946 (+)
Family: CE12|CE4|CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3413
Protein molecular weight: 66203.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00709
Location and strand information: 110977 - 112134 (-)
Family: PL10_1|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7167
Protein molecular weight: 44463.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00710
Location and strand information: 112221 - 116669 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00711
Location and strand information: 117031 - 119586 (-)
Family: GH3
Protein type: CAZyme
Protein description: Xylan 1,4-beta-xylosidase
Protein isoelectric point: 8.3491
Protein molecular weight: 95414.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00712
Location and strand information: 119693 - 120955 (-)
Family: 2.A.23.1.2
Protein type: TC
Protein description: C4-dicarboxylate transport protein

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00713
Location and strand information: 121146 - 122681 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00714
Location and strand information: 122693 - 124462 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00715
Location and strand information: 124475 - 127663 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00716
Location and strand information: 128201 - 128854 (-)
Family: null
Protein type: null
Protein description: Phosphoglycolate phosphatase

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00717
Location and strand information: 128972 - 130648 (-)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: Xylan 1,3-beta-xylosidase
Protein isoelectric point: 7.3347
Protein molecular weight: 62834.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00718
Location and strand information: 130697 - 131914 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003367_19|CGC4
Gene ID: MGYG000003367_00719
Location and strand information: 132049 - 133653 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3163
Protein molecular weight: 58908.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003367_00705	GH105_e8\|3.2.1.-	pectin
MGYG000003367_00706	CE8_e34
MGYG000003367_00708	CE8_e6\|CE4_e36\|CE12_e9
MGYG000003367_00709
MGYG000003367_00711	GH3_e159\|3.2.1.55\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan\|arabinan
MGYG000003367_00717	GH43_e184\|3.2.1.55	xylan
MGYG000003367_00719	GH28_e61

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003367_00701	Sec-independent protein translocase protein TatC	TC	98922	99731	+	2.A.64.3.2
MGYG000003367_00702	Nicotinate phosphoribosyltransferase 2	null	99715	100923	+	NAPRTase_N\| NAPRTase
MGYG000003367_00703	hypothetical protein	null	101007	104549	+	AAA_11\| AAA_11\| AAA_12
MGYG000003367_00704	Hexuronate transporter	TC	104888	106264	+	2.A.1.14.41
MGYG000003367_00705	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	106457	107674	+	GH105
MGYG000003367_00706	Pectinesterase A	CAZyme	107677	108642	+	CE8
MGYG000003367_00707	hypothetical protein	STP	108698	109045	-	AraC_binding
MGYG000003367_00708	hypothetical protein	CAZyme	109180	110946	+	CE12\| CE4\| CE8
MGYG000003367_00709	hypothetical protein	CAZyme	110977	112134	-	PL10_1\| CE19
MGYG000003367_00710	Sensor histidine kinase RcsC	TF	112221	116669	+	HTH_AraC
MGYG000003367_00711	Xylan 1,4-beta-xylosidase	CAZyme	117031	119586	-	GH3
MGYG000003367_00712	C4-dicarboxylate transport protein	TC	119693	120955	-	2.A.23.1.2
MGYG000003367_00713	hypothetical protein	null	121146	122681	-	DUF4957\| DUF5123
MGYG000003367_00714	hypothetical protein	null	122693	124462	-	SusD-like_3\| SusD_RagB
MGYG000003367_00715	TonB-dependent receptor SusC	TC	124475	127663	-	1.B.14.6.1
MGYG000003367_00716	Phosphoglycolate phosphatase	null	128201	128854	-	HAD_2
MGYG000003367_00717	Xylan 1,3-beta-xylosidase	CAZyme	128972	130648	-	GH43\| GH43_10
MGYG000003367_00718	hypothetical protein	null	130697	131914	-	DUF4861
MGYG000003367_00719	hypothetical protein	CAZyme	132049	133653	-	GH28
Protein ID	Protein Name	Type	Start	End	Strand	Signature