dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00521
Location and strand information: 68 - 2200 (-)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 4.454
Protein molecular weight: 79423.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00522
Location and strand information: 2382 - 2615 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00523
Location and strand information: 2728 - 4392 (+)
Family: GH43|GH43_4
Protein type: CAZyme
Protein description: Extracellular endo-alpha-(1->5)-L-arabinanase 2
Protein isoelectric point: 4.5179
Protein molecular weight: 62137.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00524
Location and strand information: 4675 - 5616 (-)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00525
Location and strand information: 6084 - 7592 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.1615
Protein molecular weight: 57538.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00526
Location and strand information: 7625 - 10579 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00527
Location and strand information: 10594 - 11499 (+)
Family: 3.A.1.1.4
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00528
Location and strand information: 11520 - 12389 (+)
Family: 3.A.1.1.39
Protein type: TC
Protein description: Trehalose transport system permease protein SugB

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00529
Location and strand information: 12407 - 14458 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00530
Location and strand information: 14448 - 16721 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00531
Location and strand information: 16718 - 17800 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00532
Location and strand information: 17787 - 18761 (+)
Family: 3.A.1.1.41
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00533
Location and strand information: 18968 - 20500 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00534
Location and strand information: 20685 - 22466 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00535
Location and strand information: 22533 - 23510 (+)
Family: GH43_26|CBM42|GH43
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.1688
Protein molecular weight: 37900.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00536
Location and strand information: 23704 - 24102 (+)
Family: null
Protein type: null
Protein description: Inner membrane protein YbaN

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00537
Location and strand information: 24183 - 25919 (+)
Family: 3.A.1.106.12
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00538
Location and strand information: 25912 - 27564 (+)
Family: 3.A.1.106.11
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00539
Location and strand information: 27903 - 28145 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_20|CGC1
Gene ID: MGYG000003355_00540
Location and strand information: 28471 - 32787 (+)
Family: PL1|CBM77|CBM35|PL9_1|PL9
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6103
Protein molecular weight: 156219.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003355_00521	GH51_e24
MGYG000003355_00523	GH43_e2\|3.2.1.99	arabinan
MGYG000003355_00525	GH51_e14\|3.2.1.55	arabinan
MGYG000003355_00535	GH43_e158\|CBM42_e13\|3.2.1.-	xylan
MGYG000003355_00540	PL9_e20\|PL1_e49\|CBM77_e1\|CBM35_e22\|4.2.2.2	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003355_00521	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	68	2200	-	GH51
MGYG000003355_00522	hypothetical protein	null	2382	2615	+	No domain
MGYG000003355_00523	Extracellular endo-alpha-(1->5)-L-arabinanase 2	CAZyme	2728	4392	+	GH43\| GH43_4
MGYG000003355_00524	hypothetical protein	TF	4675	5616	-	HTH_5
MGYG000003355_00525	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	6084	7592	+	GH51
MGYG000003355_00526	hypothetical protein	STP	7625	10579	+	SBP_bac_1
MGYG000003355_00527	L-arabinose transport system permease protein AraP	TC	10594	11499	+	3.A.1.1.4
MGYG000003355_00528	Trehalose transport system permease protein SugB	TC	11520	12389	+	3.A.1.1.39
MGYG000003355_00529	hypothetical protein	null	12407	14458	+	Yip1
MGYG000003355_00530	hypothetical protein	null	14448	16721	+	DUF5696
MGYG000003355_00531	hypothetical protein	TC	16718	17800	+	3.A.1.1.11
MGYG000003355_00532	L-arabinose transport system permease protein AraQ	TC	17787	18761	+	3.A.1.1.41
MGYG000003355_00533	hypothetical protein	STP	18968	20500	+	SBP_bac_1
MGYG000003355_00534	hypothetical protein	null	20685	22466	+	Laminin_G_3\| Laminin_G_3
MGYG000003355_00535	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	22533	23510	+	GH43_26\| CBM42\| GH43
MGYG000003355_00536	Inner membrane protein YbaN	null	23704	24102	+	DUF454
MGYG000003355_00537	putative ABC transporter ATP-binding protein	TC	24183	25919	+	3.A.1.106.12
MGYG000003355_00538	putative ABC transporter ATP-binding protein	TC	25912	27564	+	3.A.1.106.11
MGYG000003355_00539	hypothetical protein	null	27903	28145	+	No domain
MGYG000003355_00540	hypothetical protein	CAZyme	28471	32787	+	PL1\| CBM77\| CBM35\| PL9_1\| PL9
Protein ID	Protein Name	Type	Start	End	Strand	Signature