dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03636
Location and strand information: 32745 - 34025 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.1648
Protein molecular weight: 48204.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03637
Location and strand information: 34044 - 35669 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03638
Location and strand information: 35795 - 40216 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03639
Location and strand information: 40431 - 42320 (+)
Family: CBM35|CBM2|PL11|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 6.1658
Protein molecular weight: 70811.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03640
Location and strand information: 42339 - 43319 (-)
Family: CE0|CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.8198
Protein molecular weight: 37006.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03641
Location and strand information: 43363 - 47646 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03642
Location and strand information: 47801 - 48115 (-)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03643
Location and strand information: 48139 - 49545 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7173
Protein molecular weight: 52842.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03644
Location and strand information: 49549 - 51390 (-)
Family: CBM35|CBM2|PL11|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.2046
Protein molecular weight: 68260.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03645
Location and strand information: 51624 - 52766 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8198
Protein molecular weight: 44325.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03646
Location and strand information: 52890 - 54524 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.9223
Protein molecular weight: 61017.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03647
Location and strand information: 55366 - 57474 (-)
Family: PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.4353
Protein molecular weight: 77824.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03648
Location and strand information: 57520 - 59253 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03649
Location and strand information: 59274 - 62123 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03650
Location and strand information: 62175 - 64190 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_341|CGC2
Gene ID: MGYG000003252_03651
Location and strand information: 64213 - 67416 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003252_03636	CE12_e46
MGYG000003252_03639	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000003252_03640	CE4_e36
MGYG000003252_03643	GH105_e35\|3.2.1.172	pectin
MGYG000003252_03644	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000003252_03645	GH105_e14\|3.2.1.172	pectin
MGYG000003252_03646	CE12_e40
MGYG000003252_03647

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003252_03636	hypothetical protein	CAZyme	32745	34025	-	CE12
MGYG000003252_03637	hypothetical protein	null	34044	35669	-	Mfa_like_1
MGYG000003252_03638	Sensor histidine kinase RcsC	TF	35795	40216	-	HTH_AraC
MGYG000003252_03639	Rhamnogalacturonan endolyase YesW	CAZyme	40431	42320	+	CBM35\| CBM2\| PL11\| PL11_1
MGYG000003252_03640	hypothetical protein	CAZyme	42339	43319	-	CE0\| CE4
MGYG000003252_03641	Sensor histidine kinase RcsC	TF	43363	47646	-	HTH_AraC
MGYG000003252_03642	L-rhamnose mutarotase	null	47801	48115	-	rhaM
MGYG000003252_03643	hypothetical protein	CAZyme	48139	49545	-	GH105
MGYG000003252_03644	Rhamnogalacturonan endolyase YesW	CAZyme	49549	51390	-	CBM35\| CBM2\| PL11\| PL11_1
MGYG000003252_03645	hypothetical protein	CAZyme	51624	52766	+	GH105
MGYG000003252_03646	hypothetical protein	CAZyme	52890	54524	+	CE12
MGYG000003252_03647	Rhamnogalacturonan endolyase YesW	CAZyme	55366	57474	-	PL11_1
MGYG000003252_03648	hypothetical protein	null	57520	59253	-	SusD-like_3\| SusD_RagB
MGYG000003252_03649	hypothetical protein	TC	59274	62123	-	1.B.14.6.1
MGYG000003252_03650	hypothetical protein	null	62175	64190	-	SusD-like_3\| SusD_RagB
MGYG000003252_03651	hypothetical protein	TC	64213	67416	-	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature